Gene Information

Name : aspC (Cp316_1982)
Accession : YP_005304543.1
Strain : Corynebacterium pseudotuberculosis 316
Genome accession: NC_016932
Putative virulence/resistance : Unknown
Product : Aminotransferase AlaT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2085630 - 2086916 bp
Length : 1287 bp
Strand : +
Note : -

DNA sequence :
GTGAGTAAAAAAGACACCGCTCCCGAATCAGCACTTCTGGGCTCCGCAGGTAACCCGTTGCGTCGTAAGCGTCGCACATT
TGACCAGTCGGACAAGCTCAAAAACGTTCTGTATGAAATCCGTGGACCGGTGACTGCGTTAGCCGAGAAAATGGAGCTAG
ATGGGAACACCATCTTGAAGCTCAACACGGGCAACCCAGCAATCTTTGGTTTTGAAGCCCCCGACGTTATCATGCGTGAC
ATGATCGCGGCGCTTTCTACGTCGCAAGGCTACTCCACGTCAAAAGGCATCATTCCTGCCCGGCGCGCCATCGTCACACG
CTACGAGGTCATACCTGGCTTCCCTGCCTTCGACGTAGACGACGTGTATCTGGGCAACGGTGTTTCTGAGCTCATCATGA
TGACCATGCAGGCTTTGTTGGATAACGGCGATGAGGTCCTCATCCCGATGCCGGATTATCCACTGTGGACCGCTGCGACC
TCGCTATCCGGCGGTACTCCTGTGCATTATCTTTGCGACGAAGACGACGATTGGAACCCCTCCATCGAGGATATTCGCTC
AAAGGTCACAGAAAAGACTAAGGCCATCGTGGTGATCAATCCGAATAACCCCACGGGCGCTGTTTATTCGCCCGAGGTTC
TCCGCGATATTGTCCAGGTAGCCAGGGAACACGATCTGCTCATTCTGGTCGATGAGATTTATGACCGTATTCTGTATGAC
GGCGCCGTCCACACCAGCATCGCTACGCTTGCCCCCGACTTGCTGTGCATCACATATAACGGATTGTCCAAGGCCTACCG
GGTTGCCGGATATCGAGCAGGCTGGATGGTTATCACCGGCCCTAAGCATTACGCACACGGTTTTATCGAGGGAATCGACT
TGCTCTCAGGGACCCGCTTGTGCTCCAACGTTCCGGCTCAGCACGCTATTCAAGTAGCTCTGGGCGGACGCCAATCTATC
TATGATCTCACCTCCGAAGGTGGCCGTTTGTTGGAGCAGCGCAACGTCGCGTGGGAGAAGCTCAACCAAATTCCCGGAGT
CAGCTGTGTAAAGCCGATGGGAGCACTCTATGCGTTCCCCAAAATTGACTTGGATTATTATGACATCCACGATGACGCAC
AGCTCATGCTCGATCTGCTTCGCGCAGAAAAAATCCTCATGGTTCAGGGCACGGGCTTCAACTGGCCTCAGCCTGACCAT
TTCCGTGTGGTCACACTCCCCTGGGCAGCCGATCTTGCTGTAGCGATGGATCGTTTAGGCAACTTCCTCTCTAGTTATAA
GCAGTAA

Protein sequence :
MSKKDTAPESALLGSAGNPLRRKRRTFDQSDKLKNVLYEIRGPVTALAEKMELDGNTILKLNTGNPAIFGFEAPDVIMRD
MIAALSTSQGYSTSKGIIPARRAIVTRYEVIPGFPAFDVDDVYLGNGVSELIMMTMQALLDNGDEVLIPMPDYPLWTAAT
SLSGGTPVHYLCDEDDDWNPSIEDIRSKVTEKTKAIVVINPNNPTGAVYSPEVLRDIVQVAREHDLLILVDEIYDRILYD
GAVHTSIATLAPDLLCITYNGLSKAYRVAGYRAGWMVITGPKHYAHGFIEGIDLLSGTRLCSNVPAQHAIQVALGGRQSI
YDLTSEGGRLLEQRNVAWEKLNQIPGVSCVKPMGALYAFPKIDLDYYDIHDDAQLMLDLLRAEKILMVQGTGFNWPQPDH
FRVVTLPWAADLAVAMDRLGNFLSSYKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 0.0 99
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 0.0 99
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 0.0 99
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 0.0 99