Gene Information

Name : srtB (Cp316_1929)
Accession : YP_005304497.1
Strain : Corynebacterium pseudotuberculosis 316
Genome accession: NC_016932
Putative virulence/resistance : Unknown
Product : Sortase B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2020267 - 2021226 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence :
ATGCTAGACCCTGTAGCAAAGACTGAACGGACTAAAGCCGTTCATCGTTTGAAGCAGAAACGATTCGGGACGAAAAACAA
CCATGCATTAGCTGCGCTACTCGTGATTATTGGATTAATTGTCATGGTCTACCCAGTGGTTTCGACCCAATGGAACAATT
GGAAACAGCAACATGCAGCAGCAGAGTATGCCAAGATCGATAATTCAACGCCGAAGGTGGTTCATGAAGAAGCCTGGGAC
GCTGCTCATAAATATAACGAAGAACGTGCGCAAGGGCCGATTCTTGATCCATGGGTTAGCCGTTTTGTCCCAGATAACTA
CGCGTATCAAGAATACTTAAGCTTATTAAATACGCAGGAGGCAATGGGTCGTATTATCCTTCCATCCATAAAAACGGACC
TACCTATCTATCACGGTTCGAGCGAGGATGTCTTACAAAAAGGAATTGGTCATCTTTTTGGATCCGATCTTCCAGTGGGC
GGACGCGGGAGTCACTCGGTGTTGACTGGACATACGGGAATACCGACAGCAACACTTTTTGACAATTTAAATCGTGTTAA
AGAAGGCGATGCTTTCTTTATTCACATCGCTGGACACAAAATTAAATACGAAGTCGATCAGATCAAGATAGTTCTTCCTA
ATGAGACAGAAGATCTAAAAGTTGAAGCCGGCAAAGACTTAATCACATTAGTTACCTGTACTCCCTACGGGATCAACACA
CATCGTTTATTAGTTCGTGGACATCAAGTTTCAATAGCCGAAGAAGAAAAAAGCATGATCAACGAGGCACAAGGTGTCTC
TTGGCAATGGTGGATGTATGCACTTACCGCAATATTCATCGTAGGCGTCACTGGGCTTATCACGTGGTTAATAAAACAAT
CACGTGTGTCTTCTAAGCGGAATAAAGACTCTCTGATTGTCCCTGACTCCGAATCTACCGAGAATAAAACTGAACTGTGA

Protein sequence :
MLDPVAKTERTKAVHRLKQKRFGTKNNHALAALLVIIGLIVMVYPVVSTQWNNWKQQHAAAEYAKIDNSTPKVVHEEAWD
AAHKYNEERAQGPILDPWVSRFVPDNYAYQEYLSLLNTQEAMGRIILPSIKTDLPIYHGSSEDVLQKGIGHLFGSDLPVG
GRGSHSVLTGHTGIPTATLFDNLNRVKEGDAFFIHIAGHKIKYEVDQIKIVLPNETEDLKVEAGKDLITLVTCTPYGINT
HRLLVRGHQVSIAEEEKSMINEAQGVSWQWWMYALTAIFIVGVTGLITWLIKQSRVSSKRNKDSLIVPDSESTENKTEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 8e-97 67
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 1e-76 59
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-68 54
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-60 48
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 8e-51 46
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-51 45
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-48 44
srtE YP_005139150.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 7e-51 42