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Name : clpC (Cp316_1826) Accession : YP_005304402.1 Strain : Corynebacterium pseudotuberculosis 316 Genome accession: NC_016932 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1912936 - 1915593 bp Length : 2658 bp Strand : - Note : - DNA sequence : ATGTTCGAGAGGTTTACTGATCGTGCACGTCGCGTGATCGTCCTGGCGCAGGAAGAAGCGCGCGGCCTTAACCACAATTA CATCGGCACTGAGCACATCCTGCTCGGACTTATCCATGAGGGGGAGGGCGTTGCTGCAAAGGCCCTCGAGTCCATGGGCA TCTCCTTGGAAGCGGTTCGCCAAGAAGTAGAAGAAATCATCGGGCATGGTTCCGAGCCTCCAGTTGGGCACATCCCTTTT ACCCCCCGTGCAAAGAAAGTCCTTGAACTTTCCTTACGTGAGGGACTACAGATGGGACATAAGTACATCGGTACTGAGTT CCTGCTGTTGGGCTTGATCCGAGAAGGCGAAGGCGTCGCGGCTCAGGTATTGGTAAAAATTGGTGCAGATCTACCGCGGG TGCGCCAGCAAGTTATTCAGCTGCTTTCGGGCTATGAGGGCGGGGAGAGCCCCGAGAACAATGAGTCTGGCGGAGAGGCT GTTGGTGCTGGTACCGGTGCAGCCCGTGCCGGCCGCGGATCCGGCGCTGGCGATCGTTCCAATTCTTTGGTCTTGGATCA ATTTGGTCGGAACCTCACTCAGGCTGCCAAGGACGGCAAGCTGGACCCGGTTGTAGGCCGCGAGAAAGAAATCGAGCGCA TCATGCAGGTTCTTTCGCGCCGCACCAAAAACAATCCCGTTTTGATCGGTGAGCCCGGTGTGGGAAAGACCGCCGTGGTC GAGGGGCTGGCGCTAGATATTGTCAACGGCAAGGTGCCCGAGACTCTGAAGGATAAGCAGCTGTATTCCTTAGACCTAGG CTCCTTGGTCGCGGGGTCTCGTTATCGCGGTGACTTTGAGGAACGCCTGAAGAAGGTCCTCAAAGAGATTAATCAGCGCG GCGACATCATCTTGTTTATCGACGAGATCCACACCCTGGTGGGCGCCGGTGCGGCTGAAGGCGCTATCGACGCTGCTAGC CTGCTTAAGCCAAAGCTTGCTCGCGGAGAGCTGCAGACCATCGGAGCGACGACTCTCGACGAGTACCGTAAGCACATTGA GAAGGACGCTGCCCTTGAGCGTCGCTTCCAGCCGGTCAACGTGCCGGAACCAAGCGTGGAAATGACCATTGAGATTCTCA AGGGCCTGCGCGACCGCTACGAGGCACACCACCGCGTGTCCATCACAGACGGTGCGCTCGCTGCCGCGGCACAGTTGTCA GATCGCTATATCAATGACCGCTTTTTGCCTGATAAAGCAGTCGACCTTATAGATGAAGCCGGAGCGCGTATGCGTATCCA GCGCATGACCGCACCTGAGTCGATCCGCAAGGTTGATGACCGCATCGCGGAGGTACGTAGGGAAAAAGAAGCTGCTATTG ATGCGCAGGACTTTGAAAAGGCCGCTGGCTTGCGTGATACCGAGCGGAAGCTGAACGAGGAACGCGCGGAGAAAGAAAAG CAATGGCGTTCTGGCGATCTGGAAGAAATCGCTGAAGTCGGCGAGGAGCAGATCGCGGAGGTTCTGGGCAACTGGACCGG AATTCCAGTGTTTAAGCTGACGGAAGAAGAGTCTTCTCGTCTGCTGCGCATGGAGGATGAGCTGCACAAGCGCATTATTG GGCAGGAGGACGCAGTTAAGGCTGTATCCCGTGCTATCCGCCGTACGCGCGCCGGACTGAAAGATCCGCGCCGTCCTTCG GGCTCCTTCATCTTTGCTGGCCCATCCGGTGTGGGTAAGACCGAGCTCTCTAAAGCATTGGCTAATTTCCTCTTTGGTGA TGACGATGCGCTGATTCAGATCGATATGGGCGAGTTCCATGATCGTTTCACCGCCTCGCGCCTGTTCGGTGCACCTCCCG GATACGTTGGTTATGAGGAAGGCGGCCAGCTTACAGAGAAGGTACGTCGCAAGCCTTTCAGCGTTGTGCTTTTCGACGAG ATCGAGAAGGCCCACAAGGAGATCTACAACACGCTGCTGCAGGTGCTTGAAGACGGACGGCTTACCGACGGCCAAGGGCG CGTGGTGGACTTCAAGAACACCGTTCTGATCTTCACATCAAACCTGGGTACGCAGGATATCTCCAAGGCCGTGGGCATGG GCTTTAGCTCAGTCGGCGAGCATGATGCGGATGGCCAGTACTCCCGAATGAAGCAGAAGGTTAATGATGAGCTGAAGAAG CACTTCCGCCCTGAATTCCTTAACCGCATCGATGAGGTCGTGGTCTTCCATCAGCTAACTCAAGACCAGATCGTCCAGAT GGTGGATCTATTGGTTAGCCGCGTGGCAAAGGCCTTGGCTCAGAAAGACATGGGTATCGAGCTCACCGAGAAGGCAAAGA GCCTCTTGGCACGTAGAGGATTCGATCCGGTACTGGGCGCGCGTCCATTGCGTCGCACGATTCAGCGTGAGGTCGAGGAT GCGCTCTCTGAAAAGATTCTCTTTGGAGAGGTCGGCGCCGGCGAGATTGTCACGGTAGATGTTGAAGGCTGGGATGGAGA ATCCAAGGATACGGACAAAGCTGTTTTCACATTCGTGCCGCGTCCTAAGCCACTGCCGGATTTTGCTACGGAATCTCCTG AGGTAGTGGAGGCTCAGCAAGCCGTGGTCGACGCTGCAGATGACCCAGAGATGGTTCCTGAAGCTGATTTTGACGTAGAG GAAGCCAAGGAATCCTAA Protein sequence : MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGSEPPVGHIPF TPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKIGADLPRVRQQVIQLLSGYEGGESPENNESGGEA VGAGTGAARAGRGSGAGDRSNSLVLDQFGRNLTQAAKDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVV EGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAAS LLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLS DRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEERAEKEK QWRSGDLEEIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPS GSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDE IEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISKAVGMGFSSVGEHDADGQYSRMKQKVNDELKK HFRPEFLNRIDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDMGIELTEKAKSLLARRGFDPVLGARPLRRTIQREVED ALSEKILFGEVGAGEIVTVDVEGWDGESKDTDKAVFTFVPRPKPLPDFATESPEVVEAQQAVVDAADDPEMVPEADFDVE EAKES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 94 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-98 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005304402.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 58 |
| clpC | YP_005304402.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 2e-151 | 52 |
