Gene Information

Name : oppDF2 (Cp316_1593)
Accession : YP_005304175.1
Strain : Corynebacterium pseudotuberculosis 316
Genome accession: NC_016932
Putative virulence/resistance : Unknown
Product : Oligopeptide transport ATP-binding protein OppD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1668353 - 1669786 bp
Length : 1434 bp
Strand : +
Note : -

DNA sequence :
GTGACGCTTCTCCAAGTCCGCAATCTCACTGTCACGGGAATCCTCAAGGATGTGGCTCTGGCAGTCGACCGTGGCGAGCG
CGTCGGTTTGATTGGAGAATCAGGCTCGGGCAAAACAATGACCGCGCTCTCCATCATGCGTCTCATCAATGCGTCGGGTT
CCATTCAGCTCGATGGACAAGAGCTCACGGCGCTGTCGGAGAAAGCGATGTGCCGTATCCGGGGTCGCAAAATTGCCATG
GTTTTCCAGGAGCCCATGACGGCTCTCGACCCGCTCATGCGAGTGGATAAGCAGATTGCTCAGGTGCTCAAAATCCATTC
GGTTTCCCCACGGGGGAAGGTTGCGGAGCTGCTCTCGAGCGTAGAACTCGACCCCGCACTCGGCAGGCGTTTTCCCCACG
AGCTCTCGGGAGGACAACGCCAACGAGTACTAATCGCTATGGCTCTGGCCCATGACCCCGACGTGCTGATGTGCGATGAG
CCAACCACTGCTTTGGACGTAACCTCCCAAAAGGCGATTGTCGACCTAATTTTGCGCCTGGTCGCCGAACGTGGAACCGG
CTTGCTCTTTATCACTCATGACCTGGGTCTGGTGGCTACCACATGCGAGCGTATTCTGGTGATGCGAGGCGGCGAGGTCA
TCGAGGAAGGAACCGTAGAGCAGGTTCTCCGCTCCCCCGCCCACTCTTATACGCGCATGCTTATCGACGCCTCCCAGCTC
CCTCCTGCCCGACCGGCCCTCATTACCGATGAATCCATAGTGCGGGCGCGGGACATAAAGAAGCACTATCGCCGGCACAA
GGCGGTCGACGGCGTCGATCTCCACGTCTCCCGTGGGGAAAGAGTCGGCATTGTGGGCGGCTCGGGTTCCGGAAAGACAA
CATTGTTAAAGATGATCGCGGGACTCACACGTCCCACATCCGGCACGATCTCAGTCTCTGGCACCAAAAAGATGGTTTTC
CAAGATCCCATGCGGTCTCTGGATCCCCGCATGACCATCCGCGAGATCGTAGCCGAGCCGCTCCCCCTCGCTAGCGACGA
GCGCATCGTTGAAGTTTTGGAGGAAGTAGGTCTGAGCGGGGAGATTCTCCACCGTTTTCCCCACGAGTTCTCGGGAGGTC
AGCGCCAACGCATTTCCATAGCTCGCGCGCTGATCGCGTCTCCAGATATTTTGCTTGCCGACGAACCCGTCTCAGCCCTC
GACGTCTCAGTACGAAAGAAGGTTCTCACACTCATAGACCGGCTGGTTCACGAGCGCCATCTCACCCTCTTGTTTGTCTC
GCATGACCTCAACGTGATCCGCTCCGTGTGTTCTTCTGTGGTGGTGATGCACGAAGGTCGTATCGTGGAGGCCGGCCCTG
TAGACGAGGTGTTTACCAATCCCAAGGCCGAATACACCAAACAACTCTTAGCGGCAATCCCCCACTTAGGATGA

Protein sequence :
MTLLQVRNLTVTGILKDVALAVDRGERVGLIGESGSGKTMTALSIMRLINASGSIQLDGQELTALSEKAMCRIRGRKIAM
VFQEPMTALDPLMRVDKQIAQVLKIHSVSPRGKVAELLSSVELDPALGRRFPHELSGGQRQRVLIAMALAHDPDVLMCDE
PTTALDVTSQKAIVDLILRLVAERGTGLLFITHDLGLVATTCERILVMRGGEVIEEGTVEQVLRSPAHSYTRMLIDASQL
PPARPALITDESIVRARDIKKHYRRHKAVDGVDLHVSRGERVGIVGGSGSGKTTLLKMIAGLTRPTSGTISVSGTKKMVF
QDPMRSLDPRMTIREIVAEPLPLASDERIVEVLEEVGLSGEILHRFPHEFSGGQRQRISIARALIASPDILLADEPVSAL
DVSVRKKVLTLIDRLVHERHLTLLFVSHDLNVIRSVCSSVVVMHEGRIVEAGPVDEVFTNPKAEYTKQLLAAIPHLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 0.0 99
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 0.0 99
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 0.0 99
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 0.0 99