Gene Information

Name : hemC (RMB_04195)
Accession : YP_005302094.1
Strain : Rickettsia massiliae AZT80
Genome accession: NC_016931
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 734210 - 735265 bp
Length : 1056 bp
Strand : -
Note : COG0181 Porphobilinogen deaminase

DNA sequence :
ATGACAAATTCTATCAGAATAGGTACAAGAAAAAGTCCACTTGCTTTAATACACACTAATTTAGTTATTCAGCAAATCAA
ACAATTTTTTCCTGATATTAATTGTAAAATAGTGCCGATTATTACTAGCGGGGATTTAATCCAAAATAAACCATTATACG
ATATAGGCGGTAAAGCTTTATTTTTAAAGGAAATAGAGCAAGCCTTGCTTGATAAAAAAATTGACTTAGCTGTTCATTCT
TTAAAAGATGTACCGGGTAGAATACCTGAACCGCTAGTAATAGCTGCTGTTTTAGAGCGTGAAGACCCCAGAGATGTTTT
TGTTTGTCTAAAATATAAATCCATAGAAGAGCTGCCGCAAAATGCCGTAATAGGTAGCTCGGCAGTACGAAGAAAAGCAT
TTATCCAAAAAATAAGACCGGATTTAAAGGTAACGGTTTTTAGAGGGAATGTTGATTCAAGAATAAAAAAGCTAATGACC
GGCGAAGTTGACGCAACAATTTTAGCATATACAGGTCTTAAAAGGTTAGAGGCGTTTAATCCGGAGTATTGCCATTTGAT
AGAGTATTCACAGATGTTACCGTGCATAGGGCAGGGAGTCATTGCAGTTGAGATTAGAAAAGGCGATAATGCTATGCTTA
AGATATGCAACCAAATTAATCATCTTCCCACTTTTGAACTAATAAAACCCGAAAGAGCATTTTTAGAGTATCTAGATGCT
AATTGCCGCACTCCGATTGCTGCTTATTCACAATATCTAGATGCAGATCCTAGACATCTTTCCAAACTCGCTTATAGGGA
GGCATTTGAAGGAAACACAGAAGCACTGGCCACCGCAGCGTACAAAAGCGATCGCACAGATGCGAGTACCGGACTGACGT
ACAAATTACCCCTAGAAGTAGAGTTTGGAAAGATGTCTAATATACAAACCGATTTTATGCTCGGTAACCTTGACGGCAGT
AAAATAACTTTCCATACCGAAACTACCAATATAAAAACTTCAACAGAAGCAGGCATAAAAGCCGCTAAAATGATGTTGGA
AGCTATCTGTAAATAA

Protein sequence :
MTNSIRIGTRKSPLALIHTNLVIQQIKQFFPDINCKIVPIITSGDLIQNKPLYDIGGKALFLKEIEQALLDKKIDLAVHS
LKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMT
GEVDATILAYTGLKRLEAFNPEYCHLIEYSQMLPCIGQGVIAVEIRKGDNAMLKICNQINHLPTFELIKPERAFLEYLDA
NCRTPIAAYSQYLDADPRHLSKLAYREAFEGNTEALATAAYKSDRTDASTGLTYKLPLEVEFGKMSNIQTDFMLGNLDGS
KITFHTETTNIKTSTEAGIKAAKMMLEAICK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-45 45
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-45 45