|
Name : RMB_00155 (RMB_00155) Accession : YP_005301452.1 Strain : Rickettsia massiliae AZT80 Genome accession: NC_016931 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 26427 - 29000 bp Length : 2574 bp Strand : - Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGAATATTGATAAATTTACTGCACATGCTAAATCAGTGATAGCTAGTAGCCAATCACTTGCTGCTAAAAATGATCATCA GCAAATATTACCTTTGCATTTATTATCTAGTCTTTTAAGTGAAGAAACAGGTATAATTCAAACCCTTATTAATAATACCG GCGGTAATATAAACTTATTAAAAGATCAAGTTCAGCTAGAACTAAATAAAATCCCAAAAATTCAGATTGAGGGAGGGGGG CAAGTTTATTCTTCTGCTGAAGCTCTTAAAGTTTTAGAAAAAGCTAGTCGCATTGCTAAAGACAGTGGGGATAACTTTGT AACCATAGAGCGTATATTTGAAGCATTAACTTATGATAATACTATAGCCGGTAAAATTTTAACGAATAATGGAATTAATA ATAAAAAAATAGTAGCCGCTATTTTACAGCTTCGTAAAGGCAAAAAAGCAGATACCGAATCGGCAGAAAATAGTTACGAT GCTCTAAAGAAATACGGCAGAGACGTAACAGAGTTTGCCGAAAGCGGTAAGCTTGACCCGATAATCGGGCGTGATGAAGA AATAAGAAGAACAGTGCAGGTACTATCACGACGTATGAAAAATAATCCTGTATTGATCGGCGAACCTGGAGTCGGTAAAA CTGCTATAATAGAGGGGCTTGCACAACGAATATTTAGTAAGGACGTACCTGAATCGCTTATTAATTGCCGTATTATTGAG TTGGATATGGGAGCTTTAATAGCGGGAGCTAAATATCGAGGCGAATTTGAAGAGCGTCTTAAAGCAGTGCTTAGCGAAAT CAAAGAATCAAGCGGTGAAATTATTTTATTTATCGATGAATTGCATCTATTAGTCGGTACGGGAAAAACCGACGGTGCTA TGGATGCCTCGAATTTACTAAAGCCGATGCTTGCTCGTGGTGAGCTGCATTGTATCGGTGCTACTACTCTAGAGGAATAT CGTAAATATATCGAGAAAGATGCAGCACTTGCTCGTCGTTTTCAGCCTGTTTACGTGAGTGAGCCGACGGTTGAGGATAC TATATCAATACTTAGAGGAATTAAAGAAAAATATGAGCTGCATCATGCAGTGCGAATTTCCGATAGTGCAATAGTTGCAG CAGCGATGTTATCAAACCGTTATATTACCGATCGTTATTTACCTGATAAAGCTATTGATTTGATTGATGAAGCTTGTAGC CGTATGAAAATAGAGCTATCAAGTAAACCAGAAGAGCTTGATGAGCTGGACCGTCGTATTATTCAGATAAAAATAGAGCT TGCAGCACTTAAAAAAGAAAATGACGAGCATTCTAAAAAGAAAATAGAGCATTTAACTACAGAATTAGAAAAATTAGAGT CTAAATCCTATGATATGGGAGCTAAATGGCAAGCTGAAAAGTCTAAACTACAGCAAACACAAAAGCTCAAAGAAGAACTA GACCGTAGCCGAAACGAGCTTGAACGTGCTGAACGTGATGCTAATCTCGCTAAAGCTAGTGAGCTAAAATACGGAATTAT ACCTGAGATTATGAAAAAGATTCAGGAAGCCGAAAGTATGGATAATAAAGGGCTGTTAAAAGAAATTGTATCGGAAAGCG ATATAGCAAGTATTATCTCACGTATTACTGGTATTCCAATTGATACGATGCTATCAAGTGAACGTGAGCGTCTGCTTGTG ATGGAGCAGAAATTACGAGAATCGGTAATAGGGCAGGATGAGGCAATTAAAGGTGTTAGTGATGCGGTAAGAAGATCACG TGCAGGGATTCAAGATATTAACCGCCCGCTTGGTTCGTTCTTATTCTTAGGACCGACCGGAGTCGGTAAAACCGAGCTTA CCAAAGCCTTAGCTGGTTTTCTTTTTGATGACCGTAATGCAATACTTCGTATAGATATGTCGGAATATATGGAGAAGCAC GCTATTTCTCGCCTGATAGGAGCTCCTCCCGGCTATATCGGATATGATCAAGGCGGGGTGTTGACGGAGGCAGTAAGACG CCGTCCTTATCAGGTAATATTATTTGATGAGGTTGAAAAAGCCCATCCCGACATATTTAATATTATGCTGCAAATACTTG ATGAGGGAAGATTAACAGATAGTCAAGGTATAACGGTTGATTTTAAGAATACTATAATAGTTTTAACGTCTAATTTAGGT GCTGAGATACTCGTTAATCAGAAAGAGGACGAAGATACATATAAAGTAAAGGATGAGGTTATGGAATATGTAAAAGCAGT ATTTAAACCTGAGTTTTTAAACAGACTAGACGAGATTATATTATTCCATCGCCTAAATCGTAATAATATTCATGATATAG TTAAGATACAGCTTGAAAGCTTAAGGAAAATTTTACTAGCACAAAATATTATTCTTGAATTTGATGAATCTGCCTTAAAT TATTTAGCCGAAAAAGGTTATGATCCAAGCTTTGGAGCAAGACCCTTAAAACGCCTTATCCAGCGGGAAATACAAAATAA TTTAGCCAAAATGATTTTAGCAGGCGAAATAAGTAGCGGTAAAACGGTTAAAATAAATGCAAAGGATAAAGAATTGAAGG TAACAATGAGTTGA Protein sequence : MNIDKFTAHAKSVIASSQSLAAKNDHQQILPLHLLSSLLSEETGIIQTLINNTGGNINLLKDQVQLELNKIPKIQIEGGG QVYSSAEALKVLEKASRIAKDSGDNFVTIERIFEALTYDNTIAGKILTNNGINNKKIVAAILQLRKGKKADTESAENSYD ALKKYGRDVTEFAESGKLDPIIGRDEEIRRTVQVLSRRMKNNPVLIGEPGVGKTAIIEGLAQRIFSKDVPESLINCRIIE LDMGALIAGAKYRGEFEERLKAVLSEIKESSGEIILFIDELHLLVGTGKTDGAMDASNLLKPMLARGELHCIGATTLEEY RKYIEKDAALARRFQPVYVSEPTVEDTISILRGIKEKYELHHAVRISDSAIVAAAMLSNRYITDRYLPDKAIDLIDEACS RMKIELSSKPEELDELDRRIIQIKIELAALKKENDEHSKKKIEHLTTELEKLESKSYDMGAKWQAEKSKLQQTQKLKEEL DRSRNELERAERDANLAKASELKYGIIPEIMKKIQEAESMDNKGLLKEIVSESDIASIISRITGIPIDTMLSSERERLLV MEQKLRESVIGQDEAIKGVSDAVRRSRAGIQDINRPLGSFLFLGPTGVGKTELTKALAGFLFDDRNAILRIDMSEYMEKH AISRLIGAPPGYIGYDQGGVLTEAVRRRPYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLG AEILVNQKEDEDTYKVKDEVMEYVKAVFKPEFLNRLDEIILFHRLNRNNIHDIVKIQLESLRKILLAQNIILEFDESALN YLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGEISSGKTVKINAKDKELKVTMS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-159 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RMB_00155 | YP_005301452.1 | chaperone ClpB | VFG0079 | Protein | 1e-160 | 46 |
| RMB_00155 | YP_005301452.1 | chaperone ClpB | VFG2084 | Protein | 3e-104 | 41 |
