Gene Information

Name : hemC (RSA_04205)
Accession : YP_005300850.1
Strain : Rickettsia philipii 364D
Genome accession: NC_016930
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 743912 - 744967 bp
Length : 1056 bp
Strand : -
Note : COG0181 Porphobilinogen deaminase

DNA sequence :
ATGACAAATTCTATCAGAATAGGTACAAGAAAAAGTCCACTTGCTTTAATACACACTAATTTAGTTATTCAGCAAATCAA
ACAATTTTTTCCTGATGTCAATTGTGAAATAGTGCCGATTATTACTAGCGGGGATTTAATCCAAAATAAACCATTATACG
ATATAGGCGGTAAAGCTTTATTTTTAAAGGAAATAGAGCAAGCCTTGCTTGATAAAAAAATTGACTTAGCTGTTCATTCT
TTAAAAGATGTACCGGGTAGAATACCTGAACCGCTAGTAATAGCTGCTGTTTTAGAGCGTGAAGACCCCAGAGATGTTTT
TGTTTGTCTAAAATATAAATCTATAGAAGAGCTGCCACAAAATGCCGTAATAGGTAGCTCGGCAGTACGAAGAAAAGCAT
TTATCCAAAAAATAAGACCGGATTTAAAGGTAACGGTTTTTAGAGGGAATGTTGATTCAAGAATAAAAAAGCTAATGACC
GGCGAAGTTGACGCAACAATTTTAGCATATACAGGTCTTAAAAGGTTAGAGGTGTTTAATCCGGAGTATTGCCATTTGAT
AGAGTATTCACAGATGTTACCGTGTATAGGGCAGGGAGTCATTGCAGTTGAGATTAGAAAAGATGATAATGCTATGCTTG
AGATATGCAACCAAATTAATCATCTTCCCACTTTTGAGCTCATAAAACCCGAAAGAGCATTTTTAGAGTATCTAGATGCT
AATTGCCGCACCCCGATTGCTGCTTATTCACAATATCTAGATGCAAATCCTAGACATCTTTCCAAACTCGCTTATAGGGA
GGTATTTGAAGGAAACACAGAAGCACTTGCCACCGCAGCGTACAAAAGCAATCGCACAGATGCGAGTACCGGATTGACGT
ACAAATTACCCCTAGAAGTAGAGTTTGGGAAGATGTCTAATATACAAACCAATTTTATGCTCGGTAACCTTGATGGCAGT
AAAATAACTTTCCATACCGAAACTACCAATATAAAAACTTCAACAGAAGCAGGCATAAAAGCCGCTAAAATGATGTTAGA
AGCTATCTGTAAATAA

Protein sequence :
MTNSIRIGTRKSPLALIHTNLVIQQIKQFFPDVNCEIVPIITSGDLIQNKPLYDIGGKALFLKEIEQALLDKKIDLAVHS
LKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMT
GEVDATILAYTGLKRLEVFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEYLDA
NCRTPIAAYSQYLDANPRHLSKLAYREVFEGNTEALATAAYKSNRTDASTGLTYKLPLEVEFGKMSNIQTNFMLGNLDGS
KITFHTETTNIKTSTEAGIKAAKMMLEAICK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-46 45
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-46 45