Gene Information

Name : hemC (RCA_02295)
Accession : YP_005299514.1
Strain : Rickettsia canadensis CA410
Genome accession: NC_016929
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 531193 - 532098 bp
Length : 906 bp
Strand : -
Note : COG0181 Porphobilinogen deaminase

DNA sequence :
ATGACACATTCTATCAGAATAGGTACAAGAAAAAGTCCACTTGCTTTAATTCAAACTAATTTAGTTATTCAGCAAATTAA
ACAATTTGTTCCTGATATTAATTATAAAATAGTGCCTATTACTACTAGCGGTGATTTAATCCAAAATAAACCCTTATACG
ATATAGGAGGTAAAGCCTTATTTTTAAAGGAAATAGAGCAAGCTTTACTTGATAAAAAAATTGACTTAGCTGTTCATTCT
TTAAAGGATGTGCCTGGAAGGATTCCTGAAGATTTAATAATTGCTGCCGTTTTAGAGCGTGAAGACCCTAGAGATGTTTT
TGTTTGTCTAAAATATAAATCTATAGAAGAGCTGCCGCAAAATGCCATAATAGGTAGCTCGGCAGTACGAAGAAAAGCAT
TTATCGAAAAAATAAGATCTGATTTAAAGGTAACAGTTTTTAGAGGGAACGTTGACTCAAGAATAAAAAAGCTAATGAAT
GGTGAAGTTGATGCAACGATTTTAGCATATGCAGGGTTAAAAAGACTTAATGCGTTTAATCCTCAATATTGTCATTTGAT
AGAGTATTCACAGATGTTGCCGTGTATAGGGCAGGGAGTCATTGCAGTTGAGATTAGAAAAGACGATAATGCTATGCTTG
AGACATGCAACCAAATTAATCATCTTACTACCTTTGAATTAATAAAGCCTGAAAGAGCATTTTTAGAATATCTAGATGCT
AATTGTCGCACGCCGATTGCTGCTTACTCTAAATATTTAGATAAAGATAATATAGAAACCGATTTCATGCTCGGTAACCT
TGAAAGTAGTAAAATAACTTTCCATACTGAAACTACTAATATAAAAACCTCAAAAGAAGCAGGCATAAAAGCTGCTAAAA
TAATGTTGAGTGAATTAGAACGATAA

Protein sequence :
MTHSIRIGTRKSPLALIQTNLVIQQIKQFVPDINYKIVPITTSGDLIQNKPLYDIGGKALFLKEIEQALLDKKIDLAVHS
LKDVPGRIPEDLIIAAVLEREDPRDVFVCLKYKSIEELPQNAIIGSSAVRRKAFIEKIRSDLKVTVFRGNVDSRIKKLMN
GEVDATILAYAGLKRLNAFNPQYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLETCNQINHLTTFELIKPERAFLEYLDA
NCRTPIAAYSKYLDKDNIETDFMLGNLESSKITFHTETTNIKTSKEAGIKAAKIMLSELER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-46 41
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-46 41