Gene Information

Name : rph (RCA_01525)
Accession : YP_005299364.1
Strain : Rickettsia canadensis CA410
Genome accession: NC_016929
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 357935 - 358654 bp
Length : 720 bp
Strand : +
Note : COG0689 RNase PH

DNA sequence :
ATGAGACAGTCAGGAAGAAAAAGCAACCAATTACGTCCTATTTCATTAGAATTATCACCACTTGTTAATGCAGAAGGTTC
ATGTCTTATTAAAATAGGTAAGACGCATGTCATATGTAGTGCTACTTGCGAAACTACCGTACCACCGTTTTTACGTGGGC
AGAATCAAGGTTGGGTTACTGCTGAATACGGTATGCTTCCAAGCTCTACATCACAGCGTATTAAAAGAGAAGCAGCACTT
GGAAAACAAGGTGGAAGAACACAAGAGATACAGCGTTTGATAGGTAGGGCGATGCGATGTGTAATTGACCTAAAAAAACT
TGGTGAAAGACAAATTATTATAGATTGTGACGTGATTAATGCTGATGGTGGTACTAGAACGGCAGCAATAACAGGGAGCT
ACATAGCATTGCACCTAGCTATTAGATTATTGATGAAAAAGAGCATTTTAAAAGTAAACCCGTTAATTAGCCAAATTGCA
GCTATTTCTTGTGGTATATATAAAGGTGAGACGATACTAGATTTAGATTATTTAGAAGATAGTGATGCTGAAGTGGATAT
TAATTTTGTGTTTGCAGGTAATGGTAATCTAATAGAAGTACAAGGCACAGCAGAGAAAAAGCCTTTTTCCGAAGAGCAAT
TTTTAGCAATGTTGAAACTTGCTAAAGTCGGTGCAGCGGAATTGTTTAAACTACAAAATCAGGTACTGCTTGGGTCTTAA

Protein sequence :
MRQSGRKSNQLRPISLELSPLVNAEGSCLIKIGKTHVICSATCETTVPPFLRGQNQGWVTAEYGMLPSSTSQRIKREAAL
GKQGGRTQEIQRLIGRAMRCVIDLKKLGERQIIIDCDVINADGGTRTAAITGSYIALHLAIRLLMKKSILKVNPLISQIA
AISCGIYKGETILDLDYLEDSDAEVDINFVFAGNGNLIEVQGTAEKKPFSEEQFLAMLKLAKVGAAELFKLQNQVLLGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 7e-49 48