Gene Information

Name : M013TW_0828 (M013TW_0828)
Accession : YP_005297270.1
Strain : Staphylococcus aureus M013
Genome accession: NC_016928
Putative virulence/resistance : Virulence
Product : Superantigen enterotoxin SEB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 878414 - 879214 bp
Length : 801 bp
Strand : +
Note : -

DNA sequence : 
ATGTATAAGAGATTATTTATTTCACATGTAATTTTGATATTCGCACTGATATTAGTTATTTCTACACCCAACGTTTTAGC
AGAGAGTCAACCAGATCCTAAACCAGATGAGTTGCACAAATCGAGTAAATTCACTGGTTTGATGGAAAATATGAAAGTTT
TGTATGATGATAATCATGTATCAGCAATAAACGTTAAATCTATAGATCAATTTCTATACTTTGACTTAATATATTCTATT
AAGGACACTAAGTTAGGGAATTATGATAATGTTCGAGTCGAATTTAAAAACAAAGATTTAGCTGATAAATACAAAGATAA
ATACGTAGATGTGTTTGGAGCTAATTATTATTATCAATGTTATTTTTCTAAAAAAACGAATGATATTAATTCGCATCAAA
CTGACAAACGAAAAACTTGTATGTATGGTGGTGTAACTGAGCATAATGGAAACCAATTAGATAAATATAGAAGTATTACT
GTTCGGGTATTTGAAGATGGTAAAAATTTATTATCTTTTGACGTACAAACTAATAAGAAAAAGGTGACTGCTCAAGAATT
AGATTACCTAACTCGTCACTATTTGGTGAAAAATAAAAAACTCTATGAATTTAACAACTCGCCTTATGAAACGGGATATA
TTAAATTTATAGAAAATGAGAATAGCTTTTGGTATGACATGATGCCTGCACCAGGAGATAAATTTGACCAATCTAAATAT
TTAATGATGTACAATGACAATAAAATGGTTGATTCTAAAGATGTGAAGATTGAAGTTTATCTTACGACAAAGAAAAAGTG
A

Protein sequence : 
MYKRLFISHVILIFALILVISTPNVLAESQPDPKPDELHKSSKFTGLMENMKVLYDDNHVSAINVKSIDQFLYFDLIYSI
KDTKLGNYDNVRVEFKNKDLADKYKDKYVDVFGANYYYQCYFSKKTNDINSHQTDKRKTCMYGGVTEHNGNQLDKYRSIT
VRVFEDGKNLLSFDVQTNKKKVTAQELDYLTRHYLVKNKKLYEFNNSPYETGYIKFIENENSFWYDMMPAPGDKFDQSKY
LMMYNDNKMVDSKDVKIEVYLTTKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
seb YP_185778.1 enterotoxin B Virulence vSa1 Protein 6e-121 100
seb AAL04126.1 Seb Virulence SaPI3 Protein 5e-121 100
sec3 NP_372533.1 enterotoxin typeC3 Virulence vSa4 Protein 9e-82 70
sec3 NP_375118.1 enterotoxin C Virulence vSa4 Protein 9e-82 70
sec-bov YP_415865.1 enterotoxin C-bovine Not tested SaPIbov Protein 2e-80 69
sec-bov AAG29599.1 staphylococcal enterotoxin C-bovine Virulence SaPIbov Protein 1e-80 69
sec4 NP_645576.1 enterotoxin type C precursor Virulence vSa3 Protein 3e-77 68
sec-ov YP_005735946.1 staphylococcal enterotoxin C-ovine Virulence SaPI1 Protein 3e-79 68
unnamed AET14349.1 enterotoxin type C3 Virulence SaPI68111 Protein 5e-54 63
SAMSHR1132_16730 YP_005326181.1 enterotoxin Virulence vSa¥â Protein 2e-62 54
seg NP_372348.1 extracellular enterotoxin type G Virulence vSa¥â Protein 5e-43 46
seg NP_374931.1 extracellular enterotoxin type G Virulence vSa¥â Protein 5e-43 46
SAMSHR1132_16710 YP_005326179.1 enterotoxin Virulence vSa¥â Protein 2e-42 45
unnamed AAL26674.1 enterotoxin-like protein Virulence SCCcap1 Protein 1e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M013TW_0828 YP_005297270.1 Superantigen enterotoxin SEB VFG1802 Protein 3e-121 100
M013TW_0828 YP_005297270.1 Superantigen enterotoxin SEB VFG1804 Protein 4e-82 70
M013TW_0828 YP_005297270.1 Superantigen enterotoxin SEB VFG1805 Protein 2e-80 68
M013TW_0828 YP_005297270.1 Superantigen enterotoxin SEB VFG0954 Protein 9e-64 58
M013TW_0828 YP_005297270.1 Superantigen enterotoxin SEB VFG0951 Protein 1e-47 49