Gene Information

Name : M013TW_0620 (M013TW_0620)
Accession : YP_005297067.1
Strain : Staphylococcus aureus M013
Genome accession: NC_016928
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter, inner membranepermease protein SitD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 674319 - 675155 bp
Length : 837 bp
Strand : -
Note : -

DNA sequence :
ATGTTAGAGTTTGTCGAACATTTATTTACATATCAATTCTTGAATCGAGCATTGATAACTTCAATTATTGTAGGGATAGT
TTGTGGTACAGTTGGTAGTTTAATTGTATTACGTGGTCTTTCATTAATGGGAGATGCAATGAGTCACGCAGTATTACCTG
GTGTTGCCCTATCATTCTTATTTGGTATTCCAATGTTTATAGGCGCACTTATAACTGGTATGATCGCAAGTATTTTTATC
GGTTATATCACATCTAGTAGTAAAACGAAACCTGACGCCGCTATTGGAATTAGTTTTACCGCTTTCTTAGCTTCGGGGAT
TATTATTATTAGCTTAATAAACACTACGACAGATTTGTACCATATTCTGTTTGGTAATTTACTGGCAATCACAAATAGTG
CATTTTTAACTACTATTGTGATTGGTTCAATCGTCCTTATTCTAATCATTATTTTCTATCGTCCATTAATGATTTCTACA
TTCGATCCAACGTTTAGTAGAATGAGTGGTCTAAATACGACGTTATTACATTACTTTGTGATGTTGTTACTCTCATTAGT
AACAGTAGCAAGTATTCAAACGGTAGGTATTATTCTTGTAGTTGCACTATTAATTACACCTGCATCTACAGCATTTTTAA
TTAGTAAAAAACTATACTCAATGATGATTATAGCAAGTTTAATAAGTGTCATAAGTTCAATTGTCGGACTTTATTACAGC
TATATTTACAACATTCCTAGTGGTGCGACAATCGTACTTTGTACGTTTGTAATTTATATCATCACATTATTTTTCACAAA
ATTTACGAATAGAAAGAAACGAGGAAGTTTAACATGA

Protein sequence :
MLEFVEHLFTYQFLNRALITSIIVGIVCGTVGSLIVLRGLSLMGDAMSHAVLPGVALSFLFGIPMFIGALITGMIASIFI
GYITSSSKTKPDAAIGISFTAFLASGIIIISLINTTTDLYHILFGNLLAITNSAFLTTIVIGSIVLILIIIFYRPLMIST
FDPTFSRMSGLNTTLLHYFVMLLLSLVTVASIQTVGIILVVALLITPASTAFLISKKLYSMMIIASLISVISSIVGLYYS
YIYNIPSGATIVLCTFVIYIITLFFTKFTNRKKRGSLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 3e-50 47
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 2e-50 47
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-36 41
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-36 41
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-36 41
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-36 41
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M013TW_0620 YP_005297067.1 Manganese ABC transporter, inner membranepermease protein SitD BAC0352 Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M013TW_0620 YP_005297067.1 Manganese ABC transporter, inner membranepermease protein SitD VFG0528 Protein 2e-36 41