Gene Information

Name : M013TW_2382 (M013TW_2382)
Accession : YP_005298749.1
Strain : Staphylococcus aureus M013
Genome accession: NC_016928
Putative virulence/resistance : Virulence
Product : Gamma-hemolysin component C
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2444371 - 2445318 bp
Length : 948 bp
Strand : +
Note : -

DNA sequence :
ATGCTTAAAAATAAAATATTAGCTACAACTTTATCTGTGAGCTTACTTGCCCCTCTTGCCAATCCGTTATTAGAAAATGC
TAAAGCTGCCAACGATACTGAAGACATCGGTAAAGGAAGCGATATAGAAATTATCAAAAGGACAGAAGATAAAACAAGTA
ATAAATGGGGCGTGACTCAAAATATTCAATTTGATTTTGTGAAGGATAAAAAATATAACAAAGATGCTTTGATATTAAAG
ATGCAAGGATTCATTAGCTCTAGAACAACATATTACAACTATAAAAACACTAATCATATTAAATCTATGCGATGGCCATT
CCAATATAATATTGGTTTGAAAACAAATGATAAATATGTTTCTTTAATTAATTATTTACCTAAAAATAAAATTGAATCTA
CAAACGTGAGTCAGACATTAGGATACAATATCGGTGGTAATTTCCAATCAGCCCCATCACTCGGTGGTAATGGATCATTT
AACTATTCTAAATCGATTAGCTATACACAACAAAATTATGTAAGTGAAGTAGAACAACAAAACTCAAAAAGTGTTTTATG
GGGCGTCAAAGCGAATTCATTCGCCACTGAATCAGGTCAAAAATCAGCATTTGATAGCGATTTATTTGTAGGCTACAAAC
CTCATAGTAAAGATCCTAGAGATTATTTCGTTCCAGACAGTGATTTGCCACCTCTTGTACAAAGTGGATTTAACCCTTCA
TTTATCGCCACAGTATCTCATGAAAAAGGTTCAAGCGATACAAGCGAATTCGAAATTACTTACGGAAGAAACATGGATGT
CACTCATGCCATTAAAAGATCAACACATTATGGCAATAGTTATTTAGATGGTCATAGAATCCATAATGCATTTGTAAATA
GAAACTACACTGTGAAATACGAGGTCAATTGGAAGACTCATGAAATCAAGGTGAAAGGACAGAATTGA

Protein sequence :
MLKNKILATTLSVSLLAPLANPLLENAKAANDTEDIGKGSDIEIIKRTEDKTSNKWGVTQNIQFDFVKDKKYNKDALILK
MQGFISSRTTYYNYKNTNHIKSMRWPFQYNIGLKTNDKYVSLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGGNGSF
NYSKSISYTQQNYVSEVEQQNSKSVLWGVKANSFATESGQKSAFDSDLFVGYKPHSKDPRDYFVPDSDLPPLVQSGFNPS
FIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRIHNAFVNRNYTVKYEVNWKTHEIKVKGQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lukS-PV YP_494079.1 Panton-Valentine leukocidin, LukS-PV Virulence ¥ÕSa2 Protein 2e-113 77
lukS NP_646196.1 Panton-Valentine leukocidin chain S precursor Virulence ¥ÕSa2 Protein 2e-113 77
lukE YP_186708.1 leukotoxin LukE Virulence vSa¥â Protein 2e-88 68
lukE NP_646585.1 leukotoxin LukE Virulence vSa¥â Protein 2e-88 68
lukE NP_372344.1 leukotoxin S-subunit Virulence vSa¥â Protein 2e-88 68
lukE NP_374927.1 leukotoxin LukE Virulence vSa¥â Protein 2e-88 68
lukE YP_001332753.1 leukocidin LukE precursor Virulence vSa¥â Protein 2e-88 68
lukE YP_494460.1 leukotoxin LukE Virulence vSa¥â Protein 2e-88 68
SAKOR_01768 YP_008491956.1 Leukocidin S subunit lukE Virulence vSa¥â Protein 1e-88 68
SAOV_1909 YP_005737354.1 leukocidin chain lukM precursor Virulence ¥ÕSa3 Protein 4e-86 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M013TW_2382 YP_005298749.1 Gamma-hemolysin component C VFG1274 Protein 2e-133 99
M013TW_2382 YP_005298749.1 Gamma-hemolysin component C VFG1277 Protein 9e-114 77
M013TW_2382 YP_005298749.1 Gamma-hemolysin component C VFG1273 Protein 8e-88 68