Gene Information

Name : M013TW_1975 (M013TW_1975)
Accession : YP_005298361.1
Strain : Staphylococcus aureus M013
Genome accession: NC_016928
Putative virulence/resistance : Virulence
Product : beta-hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2033002 - 2033997 bp
Length : 996 bp
Strand : +
Note : -

DNA sequence :
ATGATGGTGAAAAAAACAAAATCCAATTCACTAAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGC
ACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGT
TATCGACCGTTTTGTATCCGAATTGGGGGCAATATAAACGTGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAAT
GATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGATAAATTATTAAGTAATGTAAAAAAAGAATATCCTTA
TCAAACACCTGTACTAGGTCGTTCTCAATCAGGGTGGGACAAAACTGAAGGTAGCTACTCATCAACTGTTGCTGAAGATG
GTGGCGTAGCGATTGTAAGTAAATATCCTATTAAAGAAAAAATCCAGCATGTTTTCAAAAGCGGTTGTGGATTCGATAAT
GATAGCAACAAAGGCTTTGTTTATACAAAAATAGAGAAAAATGGTAAGAACGTTCACGTTATCGGTACACATACACAATC
TGAAGATTCACGTTGTGGTGCTGGACATGATCGAAAAATTAGAGCTGAACAAATGAAAGAAATCAGTGACTTTGTTAAAA
AGAAAAATATCCCTAAAGATGAAACGGTATATATAGGTGGCGACCTTAATGTTAATAAAGGTACTCCAGAGTTCAAAGAT
ATGCTTAAAAACTTGAATGTAAATGATGTTCTATATGCAGGTCATAATAGCACATGGGACCCTCAATCAAATTCAATTGC
GAAATATAATTACCCTAATGGTAAACCAGAACATTTAGACTATATATTTACAGATAAAGATCATAAACAACCAAAACAAT
TAGTCAATGAAGTTGTGACTGAAAAACCTAAGCCATGGGATGTATATGCGTTCCCATATTACTACGTTTACAATGATTTT
TCAGATCATTACCCAATCAAAGCCTATAGTAAATAG

Protein sequence :
MMVKKTKSNSLKKVATLALANLLLVGALTDNSAKAESKKDDTDLKLVSHNVYMLSTVLYPNWGQYKRADLIGQSSYIKNN
DVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGCGFDN
DSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVNKGTPEFKD
MLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDF
SDHYPIKAYSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 3e-125 99
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 6e-125 99
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 1e-124 99
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 6e-72 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M013TW_1975 YP_005298361.1 beta-hemolysin VFG1798 Protein 2e-139 100
M013TW_1975 YP_005298361.1 beta-hemolysin VFG0674 Protein 3e-72 56