Gene Information

Name : RPK_04960 (RPK_04960)
Accession : YP_005295611.1
Strain : Rickettsia rickettsii Hlp#2
Genome accession: NC_016915
Putative virulence/resistance : Unknown
Product : succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 855534 - 856175 bp
Length : 642 bp
Strand : +
Note : COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit

DNA sequence :
ATGACTATAATGTCGGGCGGATTCGGTCTATGCGGTATTCCTGAAAATTTAATAAATGCACTTCTTAAAAGCAATGTTCA
AAATTTAACAGTTATAAGCAATAATTGTGGTGTTGACAACTTCGGACTTGGGCTTCTTCTTCAAACTAAACAAATAAAAA
AAATGATTTCTTCGTATGTCGGAGAAAATAAGATTTTTGAGCAACAATATCTTGATAAGGTTTTAGAGCTTGAGCTAAAC
CCACAAGGCACTTTAGCTGAACAAATTAGGGCTACTTGTATGGGAATTCCAGCTTTTTATACTAAAACAGGTATAGGTAC
AATTGTAGAGGAAGGTAAAGAAACAAAGGAGTTTAACGGCAAAAAATATATCATGGAAACTGCCCTTAAAGCTGACCTTG
CTATTATTAAAGGCTTTAAAGCTGATAAAAGCGGCAACGTGATTTATAATAAAACTGCACGAAATTTTAATGCAGTCATG
GCAGGTGCCGCTAAAGTTACAGTTTGTGAAGTAGAGGAAATAGTTGAGGTGGGAGAGCTTGACCCTAACAATATTCACAC
ACCTAATATTTTCATACAGCGATTAATAGTAGGTGAAAAATATGAGAAACGTATTGAGCAATTAACTGTCAGGGAAAAAT
AA

Protein sequence :
MTIMSGGFGLCGIPENLINALLKSNVQNLTVISNNCGVDNFGLGLLLQTKQIKKMISSYVGENKIFEQQYLDKVLELELN
PQGTLAEQIRATCMGIPAFYTKTGIGTIVEEGKETKEFNGKKYIMETALKADLAIIKGFKADKSGNVIYNKTARNFNAVM
AGAAKVTVCEVEEIVEVGELDPNNIHTPNIFIQRLIVGEKYEKRIEQLTVREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 2e-27 46