Gene Information

Name : hslU (RPN_04465)
Accession : YP_005292857.1
Strain : Rickettsia rickettsii Brazil
Genome accession: NC_016913
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit HslU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 733648 - 735000 bp
Length : 1353 bp
Strand : -
Note : COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit

DNA sequence :
ATGAAAGCTACTAAAACTACTTATAAAAAAGACCCTATGGGGCTTACCCCTTCTCAAATAGTGAATGAACTGAATAGATT
TATCGTAGGTCAAGAAAAGGCCAAAAAAGCTGTTGCTATTGCACTTAGAAATCGTTGTCGTCGTAAAAGAGTAGAAGGTA
ATTTACGTAATGAAATAGTACCAAAAAATATTTTAATGATTGGTTCAACCGGTGTCGGGAAAACAGAAATAGCACGACGC
CTTGCAACGCTGACTAATTCTCCTTTCTATAAAATTGAAGCAACTAAATTTACCGAAGTCGGATATGTAGGGCGTGATGT
AGAATCAATAATTCGTGATTTAGTCGAAATAGCCGTTAATACTGAAAAAACTTTAGCAAAAACGAAAGTAGATATTCATG
CCCGTGAAAAAGCAATCGAGAGAATATTAGATAGTTTAGTAGGTAAAACTTCTAGTAGTGAGACTAGAGAAAAGTTCAAA
GAAAAAATTTTAAACGGCGAACTTGATGATACGGAAATTGAAATTAGCGTAGCTGATACTACACCTGTCGGCGGTGGAAG
TTTTGAAATACCGGGTATGCCGGGAGCATCTATGGGCGTTCTTAATCTTGGCGATATGATTGGACGAGCCCTTGGCAGTA
GTAAGACTAAAACAAAAAAAATGCTAGTTAAAGATGCTATGGCTATTATTATACCTGAAGAATCAGAAAAATTAATAGAC
CAAGAAAAAATTATTCAGCAAGCTATAAATTTAGCTGAAAATGATGGTATAGTTTTTATTGATGAAATTGATAAAATAGC
TTCAACTGGTAGTTCCAGAGCAAAAAATGCTGAAATAAGTAGAGAGGGAGTGCAAAGAGATTTGCTACCTTTGATAGAGG
GCACGACGGTTAATACTAAATATGGACCGGTTAAAACCGATCATATATTATTTATTGCTTCCGGTGCTTTTCATATTGCT
AAACCTTCTGATTTATTACCGGAGTTACAAGGAAGGTTACCGATTAGAGTAGAATTAAATTCGCTTACCAAAGATGATAT
GATTAAAATATTGCTTGAGCCTGAAACTAGTTTAATAAAACAATATTCGGCGTTAATAGGTACTGAAGACGTACGTCTTG
AATTTGCTGCTTCTGCTATTGAGAAGATAGCGGATTATGCGATCACCGTTAATTTAGAAGTCGAGGATATAGGGGCTAGA
AGGCTGCATACTATACTTGAGAATTTGCTTGAGGATATAAGCTTTGAAGCTAGCGAAATGAAAGGCAAAAAAATAACTAT
CGATGATAAATTCGTAGAAAATCAATTATCAAAAATAATAACTAATCTCGACTTAGCTAAGTTTGTTCTGTAG

Protein sequence :
MKATKTTYKKDPMGLTPSQIVNELNRFIVGQEKAKKAVAIALRNRCRRKRVEGNLRNEIVPKNILMIGSTGVGKTEIARR
LATLTNSPFYKIEATKFTEVGYVGRDVESIIRDLVEIAVNTEKTLAKTKVDIHAREKAIERILDSLVGKTSSSETREKFK
EKILNGELDDTEIEISVADTTPVGGGSFEIPGMPGASMGVLNLGDMIGRALGSSKTKTKKMLVKDAMAIIIPEESEKLID
QEKIIQQAINLAENDGIVFIDEIDKIASTGSSRAKNAEISREGVQRDLLPLIEGTTVNTKYGPVKTDHILFIASGAFHIA
KPSDLLPELQGRLPIRVELNSLTKDDMIKILLEPETSLIKQYSALIGTEDVRLEFAASAIEKIADYAITVNLEVEDIGAR
RLHTILENLLEDISFEASEMKGKKITIDDKFVENQLSKIITNLDLAKFVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 4e-90 47