Gene Information

Name : rph (RPN_01620)
Accession : YP_005292342.1
Strain : Rickettsia rickettsii Brazil
Genome accession: NC_016913
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 260383 - 261102 bp
Length : 720 bp
Strand : +
Note : COG0689 RNase PH

DNA sequence :
ATGAGACAGTCAGGAAGAAAAAGTAACCAATTACGTCCTATTTCATTAGAATTATCCCCGCTTATTAATGCGGAAGGTTC
ATGTCTTATTAAAATCGGTAATACACATGTCATGTGTAGTGCTACTTGTGAAACTACCGTACCGCCATTCTTGAGGGGAC
AAAATCAAGGCTGGATTACTGCCGAGTACGGTATGCTTCCCGGTTCTACATCACAGCGTATTAAAAGAGAAGCGGCACTT
GGGCAACAAGGCGGCAGAACGCAAGAGATACAGCGTTTAATAGGTAGGGCGATGCGATGTGTAATTGATGTGAGGAAACT
AGGCGAGAGGCAAATTATCATAGATTGTGATGTTATTAATGCTGACGGCGGTACTAGAACTGCAGCAATAACAGGGAGCT
ACGTAGCATTGCACCTAGCTATTAGGTCCTTGATGAAAAAGAGAGTTTTAAAGGTGAACCCGTTAATTAGTCAAATTGCA
GCTATTTCTTGCGGTATATATAAAGGTGAGGTGATACTAGATTTGGATTATTTAGAAGATAGTGATGCGGACGTGGATAG
TAATTTTGTGTTTGCAGGTAACGGTAATTTAATCGAAGTACAAGGCACGGCAGAGAAAAATCCTTTTTCCGAAGAGCAGT
TTTTAGCAATGTTAAAACTTGCTAAAGGCGGAGCTGCGGAATTATTTAAACTACAAAATCAGGTACTGCTTGGGTCTTAG

Protein sequence :
MRQSGRKSNQLRPISLELSPLINAEGSCLIKIGNTHVMCSATCETTVPPFLRGQNQGWITAEYGMLPGSTSQRIKREAAL
GQQGGRTQEIQRLIGRAMRCVIDVRKLGERQIIIDCDVINADGGTRTAAITGSYVALHLAIRSLMKKRVLKVNPLISQIA
AISCGIYKGEVILDLDYLEDSDADVDSNFVFAGNGNLIEVQGTAEKNPFSEEQFLAMLKLAKGGAAELFKLQNQVLLGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 5e-43 50