Gene Information

Name : SAVC_04640 (SAVC_04640)
Accession : YP_005290525.1
Strain : Staphylococcus aureus VC40
Genome accession: NC_016912
Putative virulence/resistance : Unknown
Product : dihydrolipoamide dehydrogenase PdhD
Function : -
COG functional category : -
COG ID : -
EC number : 1.8.1.4
Position : 1010683 - 1012089 bp
Length : 1407 bp
Strand : +
Note : COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes

DNA sequence :
ATGGTAGTTGGAGATTTCCCAATTGAAACAGATACTATAGTAATCGGAGCAGGTCCTGGTGGATACGTTGCAGCAATTCG
TGCAGCTCAATTAGGACAAAAAGTAACAATCGTTGAGAAAGGTAATCTTGGTGGTGTTTGCTTAAACGTAGGATGTATTC
CTTCAAAAGCATTACTACATGCTTCTCACCGTTTTGTTGAAGCACAACATTCTGAAAACTTAGGTGTTATTGCTGAAAGT
GTTTCTTTAAACTTCCAAAAAGTTCAAGAATTCAAATCATCAGTTGTTAATAAATTAACTGGTGGTGTTGAAAGCTTACT
TAAAGGTAACAAAGTTAACATCGTTAAAGGTGAAGCATATTTCGTAGATAACAATAGCTTACGTGTTATGGACGAAAAGA
GCGCACAAACATACAACTTTAAAAATGCAATCATTGCAACAGGTTCAAGACCAATTGAAATTCCTAATTTCAAATTCGGT
AAACGTGTTATCGACTCAACAGGTGCTTTAAACTTACAAGAAGTACCAGGTAAATTAGTTGTAGTTGGTGGAGGATACAT
TGGATCAGAATTAGGTACAGCATTTGCTAACTTTGGTTCAGAAGTAACCATCCTTGAAGGTACTAAAGATATCTTAGGTG
GCTTCGAAAAACAAATGACACAACCTGTTAAAAAAGGTATGAAAGAAAAAGGTGTTGAAATCGTTACTGAAGCTATGGCT
AAATCAGCTGAAGAAACAGATAACGGAGTTAAAGTTACTTATGAAGCTAAAGGCGAAGAGAAAACAATCGAAGCTGATTA
TGTATTAGTAACTGTAGGTCGTCGTCCAAACACAGACGAATTAGGCCTAGAAGAATTAGGTGTTAAATTCGCTGACCGTG
GATTATTAGAAGTTGATAAACAAAGCCGTACGTCTATCAGCAATATCTATGCAATTGGTGATATCGTTCCAGGTTTACCA
CTTGCTCACAAAGCTAGCTATGAAGCTAAAGTTGCTGCTGAAGCAATTGATGGTCAAGCTGCTGAAGTTGATTACATTGG
TATGCCAGCAGTATGCTTTACTGAACCAGAATTAGCTACAGTTGGTTATTCAGAAGCGCAAGCTAAAGAAGAAGGTTTAG
CAATTAAAGCTTCTAAATTCCCATATGCAGCAAATGGTCGTGCATTATCATTAGATGATACTAACGGATTTGTTAAACTT
ATTACACTTAAAGAAGATGATACTTTAATCGGTGCTCAAGTAGTTGGTACTGGTGCATCAGATATTATCTCTGAATTAGG
TTTAGCAATTGAAGCTGGTATGAATGCTGAAGATATCGCATTAACAATCCATGCACATCCAACATTAGGTGAGATGACTA
TGGAAGCAGCAGAAAAAGCTATCGGATACCCAATCCATACAATGTAA

Protein sequence :
MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQHSENLGVIAES
VSLNFQKVQEFKSSVVNKLTGGVESLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFKFG
KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGTKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMA
KSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLP
LAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEGLAIKASKFPYAANGRALSLDDTNGFVKL
ITLKEDDTLIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 3e-109 50