Gene Information

Name : SAVC_02180 (SAVC_02180)
Accession : YP_005290036.1
Strain : Staphylococcus aureus VC40
Genome accession: NC_016912
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 500134 - 501021 bp
Length : 888 bp
Strand : +
Note : COG0214 Pyridoxine biosynthesis enzyme

DNA sequence : 
ATGAGTAAAATTATTGGATCAGACAGAGTCAAAAGAGGTATGGCTGAAATGCAAAAAGGCGGCGTTATTATGGATGTCGT
TAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCTGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTA
GAGCTGCTGGTGGTGTTGCACGTATGGCAAACCCTAAAATTGTAGAAGAAGTAATGAATGCTGTTTCTATTCCAGTCATG
GCTAAAGCACGTATTGGTCATATCACTGAAGCAAGAGTATTAGAGGCGATGGGTGTTGACTATATTGATGAATCAGAAGT
GTTAACACCAGCAGATGAGGAATATCACTTAAGAAAAGATCAATTTACAGTACCATTTGTATGTGGATGTCGTAATTTAG
GTGAAGCTGCGCGTAGAATTGGTGAAGGTGCTGCTATGTTACGTACTAAAGGTGAACCAGGTACAGGTAATATTGTTGAA
GCTGTAAGACATATGAGACAAGTTAATTCAGAAGTTAGTCGATTGACTGTAATGAATGATGATGAGATTATGACTTTTGC
GAAAGATATCGGTGCGCCTTATGAAATTTTAAAACAAATTAAAGACAATGGTCGTTTACCGGTAGTTAACTTTGCAGCTG
GTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCTGACGGTGTATTCGTTGGATCAGGTATTTTT
AAATCAGAAGATCCAGAAAAATTTGCTAAAGCAATTGTTCAAGCAACAACACATTACCAAGACTATGAACTAATTGGAAG
ATTAGCAAGTGAACTTGGCACTGCTATGAAAGGTTTAGATATCAATCAATTATCATTAGAAGAACGTATGCAAGAGCGTG
GTTGGTAA

Protein sequence : 
MSKIIGSDRVKRGMAEMQKGGVIMDVVNAEQARIAEEAGAVAVMALERVPSDIRAAGGVARMANPKIVEEVMNAVSIPVM
AKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVE
AVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPYEILKQIKDNGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIF
KSEDPEKFAKAIVQATTHYQDYELIGRLASELGTAMKGLDINQLSLEERMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 5e-80 61
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-80 61
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-80 61