Gene Information

Name : SAVC_12200 (SAVC_12200)
Accession : YP_005292017.1
Strain : Staphylococcus aureus VC40
Genome accession: NC_016912
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein Cap1A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2644149 - 2644811 bp
Length : 663 bp
Strand : -
Note : COG3944 Capsular polysaccharide biosynthesis protein

DNA sequence : 
ATGAAAGAAAAGTTTGATTTAGTAAAACTATTAAATATTCTAAAGAAGAATATTAAATTATTGCTTATTTTACCGGCAAT
ATGTCTTGTAGTAAGTGCGGCATTAACCTTTTTTGTTATGCCTGACAAATATACTGCTTCTACTCAAATATTAGTGAACA
TGAAAAAGTCCTCAAGTGATTTAGCTTTCCAAAATGTTCAAAGTAGTTTGCAGTCTGTTAATACATATACGGAAATTATC
AAAAGTCCTAGAATTCTAGATAAAGTATCTAGAGAATTTGATGGTCAGTATTCAACAGCTGAGTTGAATTCATTTTTAAA
AGTAACCAATCAAACAAACTCTCAAATTATTACTGTATCAGTTACCACTGGGAATAAATCTGAATCTGACAAAATTGTTA
ATAAAATATCTAAAGTTTTTGCTCATGACATGCCTAAAATTATGAGTGTTGATAATGTTACGATACTTTCCTCAGCACAT
GATAATGCTGTAAAAGTATCTCCAATAGTATCTGTCAACTTAGTTATCAGCATTATTGTTGGTATTGTTTTAGCAATATT
GATTATTTTCTTAAAAGAATTATTAGATAAGCGTATTAAGACAGAAGAAGATGTTGAATCGCAACTAGGATTACCTATTT
TAGGTTCAATACAAAAATTTTAA

Protein sequence : 
MKEKFDLVKLLNILKKNIKLLLILPAICLVVSAALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEII
KSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVSVTTGNKSESDKIVNKISKVFAHDMPKIMSVDNVTILSSAH
DNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1A AAA64640.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 9e-39 56
SSP0060 YP_300150.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 1e-38 52