Gene Information

Name : SAVC_06325 (SAVC_06325)
Accession : YP_005290860.1
Strain : Staphylococcus aureus VC40
Genome accession: NC_016912
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator ArlR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1365295 - 1365954 bp
Length : 660 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGACGCAAATTTTAATAGTAGAAGATGAACAAAACTTAGCAAGATTTCTTGAATTGGAACTCACACATGAAAATTACAA
TGTGGACACAGAGTATGATGGACAAGACGGTTTAGATAAAGCGCTTAGCCATTACTATGATTTAATCATATTAGATTTAA
TGTTGCCGTCAATTAATGGCTTAGAAATTTGTCGCAAAATTAGACAACAACAATCTACACCTATCATTATAATTACAGCG
AAAAGTGATACGTATGACAAAGTTGCTGGGCTTGATTACGGTGCAGACGATTATATAGTTAAGCCGTTTGATATTGAAGA
ACTTTTAGCAAGAATTCGTGCAATTTTACGTCGTCAGCCACAAAAGGATATTATCGATGTCAACGGTATTACAATTGATA
AGAACGCTTTTAAAGTGACGGTAAATGGCGCAGAAATTGAATTAACAAAAACAGAGTATGATTTACTATATCTTCTAGCT
GAAAATAAAAACCATGTTATGCAACGGGAACAAATTTTAAATCATGTATGGGGTTATAATAGTGAAGTAGAAACAAATGT
CGTAGATGTTTATATAAGATATTTACGAAACAAGTTAAAACCATACGATCGTGACAAAATGATTGAAACAGTTCGTGGCG
TTGGGTATGTGATACGATGA

Protein sequence : 
MTQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSINGLEICRKIRQQQSTPIIIITA
KSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRRQPQKDIIDVNGITIDKNAFKVTVNGAEIELTKTEYDLLYLLA
ENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-33 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-33 44
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR NC_002758.1121390.p0 Protein 2e-90 100
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR NC_010079.5776364.p0 Protein 2e-90 100
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR NC_002952.2859858.p0 Protein 2e-90 100
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR NC_007622.3794948.p0 Protein 2e-90 100
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR NC_003923.1003417.p0 Protein 2e-90 100
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR NC_013450.8614146.p0 Protein 2e-90 100
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR NC_002951.3238224.p0 Protein 2e-90 100
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR NC_007793.3914065.p0 Protein 2e-90 100
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR AE015929.1.gene1106. Protein 3e-74 85
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR HE999704.1.gene1528. Protein 3e-48 53
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR BAC0125 Protein 7e-33 44
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR BAC0197 Protein 3e-31 43
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR AF155139.2.orf0.gene Protein 5e-31 42
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR NC_014475.1.orf0.gen Protein 4e-28 41
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR NC_005054.2598277.p0 Protein 4e-28 41
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR BAC0308 Protein 1e-30 41
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR DQ212986.1.gene4.p01 Protein 2e-28 41
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR BAC0111 Protein 5e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR VFG0596 Protein 8e-34 45
SAVC_06325 YP_005290860.1 DNA-binding response regulator ArlR VFG1563 Protein 3e-26 41