Gene Information

Name : SAVC_00575 (SAVC_00575)
Accession : YP_005289716.1
Strain : Staphylococcus aureus VC40
Genome accession: NC_016912
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis galactosyltransferase Cap5M
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 132076 - 132633 bp
Length : 558 bp
Strand : +
Note : COG2148 Sugar transferases involved in lipopolysaccharide synthesis

DNA sequence : 
ATGAAGCGATTATTCGATGTAGTGAGTTCAATATATGGTTTAGTAGTTTTAAGTCCGATTCTGTTAATTACAGCATTACT
AATTAAAATGGAATCACCTGGACCAGCCATTTTCAAACAAAAAAGACCGACGATTAATAATGAATTGTTTAATATTTATA
AGTTTAGATCAATGAAAATAGACACACCTAATGTTGCAACTGATTTAATGGATTCAACATCGTATATAACAAAGACAGGG
AAGGTCATTCGTAAGACCTCTATTGATGAATTGCCACAATTATTGAATGTTTTAAAAGGAGAAATGTCAATTGTAGGTCC
TAGACCAGCGCTTTATAATCAATACGAATTAATCGAAAAACGTACAAAAGCGAACGTGCATACGATTAGACCAGGTGTGA
CAGGACTAGCTCAAGTGATGGGGAGAGATGATATCACTGATGATCAAAAAGTAGCGTATGATCATTATTACTTAACACAT
CAATCTATGATGCTTGATATGTATATCATATATAAAACAATTAAAAATATCGTTACTTCAGAAGGTGTGCATCACTAA

Protein sequence : 
MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTG
KVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTH
QSMMLDMYIIYKTIKNIVTSEGVHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 4e-63 69
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 9e-63 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAVC_00575 YP_005289716.1 capsular polysaccharide biosynthesis galactosyltransferase Cap5M VFG1309 Protein 3e-85 99
SAVC_00575 YP_005289716.1 capsular polysaccharide biosynthesis galactosyltransferase Cap5M VFG1369 Protein 3e-32 49
SAVC_00575 YP_005289716.1 capsular polysaccharide biosynthesis galactosyltransferase Cap5M VFG0032 Protein 2e-14 41