Gene Information

Name : smpB (RPM_03325)
Accession : YP_005288875.1
Strain : Rickettsia rickettsii Hauke
Genome accession: NC_016911
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 587593 - 588051 bp
Length : 459 bp
Strand : +
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGACTGAATATAAGAAAGTTATTGCACAAAATAAGAAAGCCCTTTTTCATTATTTTATTGAAGAAAGATTAGAAGCGGG
TATTGTATTAAAGGGTAGTGAAGTACGGTCTCTGCGTCAAGGCAAAGCTTCTATAGAAGAAAGTCATGCGGCAGATACCG
GACATGAGGTATTTTTGTATAACTGCCATATTGCAGAATATGAAAAAGCGAATAGATTTAATCATGCTACTCGTAGACCA
CGTAAATTATTGTTGCATACTAAAGAGATAAAGAAAATTATCGGTAGAATTAGAATAAAAGGCTATACGCTAGTAGCTCT
TTCTATGTATTTTAATAAAAAAAATAAAGTGAAAGTTGAACTTGGTATTGCTAAAGGTAAGAAATTACATGATAAAAGAG
AGTCAATTAAAGAAAAAGACTGGAAAAGAGATCAGAGCAGATTAATAAGACAGAAGTAA

Protein sequence :
MTEYKKVIAQNKKALFHYFIEERLEAGIVLKGSEVRSLRQGKASIEESHAADTGHEVFLYNCHIAEYEKANRFNHATRRP
RKLLLHTKEIKKIIGRIRIKGYTLVALSMYFNKKNKVKVELGIAKGKKLHDKRESIKEKDWKRDQSRLIRQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 4e-23 48
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 6e-20 47
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-18 46