Gene Information

Name : GPOL_174p00390 (GPOL_174p00390)
Accession : YP_005285426.1
Strain :
Genome accession: NC_016907
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 33552 - 34364 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence :
ATGGCCACCACACGTCCCAGCGCACCCTCTGATGCCGACAAGTTGATCGCCCATCAATCCAGGCTCCTCAAAGCACCGCG
GATCGCCCAGAACTATGCCCGGATCGCCGAGCAAGGCCGGGCCGCGGGTTGGCCGTTGGAGGACTATCTGGCCGCCGTGC
TCGCGGTGGAGTCCAATGCCCGCGCCGAATCGGGTGCGCGCCTTCGTATTCGAGCCGCGGGGTTCCCGGCGATCAAGACG
ATCGCCGATTTCGATTTCACCGCCCAACCCGCGGTGGACCGCGCCCAAATCGCCCGCCTCGAAGCCGGTGGCTGGATTTC
CGAAGCACGTAACATCGTCCTCCTCGGACCGCCGGGCACCGGGAAAACCCATCTCGCGACCGCGCCGGCCGTGGCCGCCG
CCCACACCGGCTATCGGGTCGGGTTCGCCTCGGCGACCGCATGGATCACCCGGCTGGCCGAGGCCCACCGCCTCGAGCGG
CTCGATGCCGAGCTCAAGAAGATCAGCCGGATCGGGCTCATCGTGATCGACGAAGTCGGCTACATTCCCTTCGATGCCGA
AGCGGCCAACCTGTTCTTCCAACTGGTCTCGAGTCGATACGAGAAGTCGTCGATCATCTTGACCTCCAACCTGCCGTTCT
CGCGGTGGGGAGAGGTCTTCGGCGAGGCCACCATCGCCTCAGCCATGATCGACCGGATCGTGCACCACGCCGACGTGATC
GCCCTCAAGGGCACCAGCTACCGCATCAAACACACCGCAATCGAGTCACTGCCTTCCGTCGACGCTGACCGTGAGGCAAA
CTCAAACCCGTAA

Protein sequence :
MATTRPSAPSDADKLIAHQSRLLKAPRIAQNYARIAEQGRAAGWPLEDYLAAVLAVESNARAESGARLRIRAAGFPAIKT
IADFDFTAQPAVDRAQIARLEAGGWISEARNIVLLGPPGTGKTHLATAPAVAAAHTGYRVGFASATAWITRLAEAHRLER
LDAELKKISRIGLIVIDEVGYIPFDAEAANLFFQLVSSRYEKSSIILTSNLPFSRWGEVFGEATIASAMIDRIVHHADVI
ALKGTSYRIKHTAIESLPSVDADREANSNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 9e-44 43
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-43 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-43 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-43 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-43 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-43 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-43 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-43 42
unnamed CAA21402.1 - Not tested HPI Protein 2e-43 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-43 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-43 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_174p00390 YP_005285426.1 transposase VFG1663 Protein 5e-44 43
GPOL_174p00390 YP_005285426.1 transposase VFG1627 Protein 7e-44 42
GPOL_174p00390 YP_005285426.1 transposase VFG1606 Protein 7e-44 42
GPOL_174p00390 YP_005285426.1 transposase VFG1515 Protein 7e-44 42