Gene Information

Name : GPOL_c08680 (GPOL_c08680)
Accession : YP_005281299.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Resistance
Product : sodium/solute symporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1010197 - 1011828 bp
Length : 1632 bp
Strand : -
Note : -

DNA sequence :
ATGACCACTCTCGCAGCATCTGCCGCCGTGGGTAACCCCATCGCGAACATCGCCATCTTCGTCGCCTTCGTCGCCATCAC
GTTGTTCGTGGTGATCCGCGCGAGCAAGAAGAACGCGTCGGCCACCGACTACTTCACCGGTGGCCGCGCGTTCTCCGGAC
CCCAGAACGGCATCGCCATCGCCGGTGACTATCTCTCCGCCGCCAGCTTCCTCGGCATCGCCGGCGCCATCGCCGTGTAC
GGCTATGACGGCTTCCTCTACTCCATCGGATTCCTCGTGGCATGGCTGGTGGCATTGCTGCTCGTCGCCGAATTGCTGCG
CAACACCGGCAAATTCACCATGGCCGACGTCTTGAGCTTCCGCCTCAAGCAGCGCCCGGTACGACTGGCGGCGGCGATCT
CGACGCTGGCGGTCTCGCTGTTCTATCTGCTGGCGCAGATGGCCGGCGCCGGCGGTCTGGTCGCCCTGCTGCTCGACGTG
ACCTCGCGGACCGGGCAGTCGATCGTGATCGCCGTGGTCGGCGCCCTGATGATCGTCTATGTGCTCGTCGGCGGAATGAA
GGGCACCACGTGGGTGCAGATCATCAAGGCTGTGCTGCTGATCGCGGGTGCCGCGTTCATGACGGTCCTGGTGCTGGCCA
AGTTCGGACTCAACGTGTCCCACATCCTGGGTGGCGCGCAGGATGCGATCAGCGGATCGTCTAGCGAAAAGGTCGCCGCC
CGTGACGTTCTCGCGCCCGGCGCCAAGTACGGCGGGTCGATGGAATCGCAGATCAACTTCATCTCACTGGCCATCGCCCT
GGTTCTCGGCACCGCCGGCCTACCGCATGTGCTGATGCGTTTCTACACCGTCCCGACCGCGAAAGAGGCTCGGCGCTCGG
TGGTCTGGGCGATCGCGCTCATCGGTGCGTTCTACCTGTTCACCCTCATCCTCGGTTACGGTGCCGCCGCGATCGTCGGA
CCCGACCGCATCCTCGCGGCCGCCGGCAAGGAGAACGCCGCAGCGCCACTACTCGCCTTCGAACTCGGTGGCACGATCCT
GCTCGGCATCATCGCAGCCGTCGCGTTCGCGACGATCCTCGCCGTCGTCGCCGGACTGACGATCACCGCCTCGGCGTCCT
TCGCCCACGACATCTACGCCAGCGTCATCAAGCGCGGCAAGGTCAGCGAGGACGACCAGGTCCGCGTATCACGCTACGCC
GCAATCACTCTCGGCGTCCTCGGAATCGTGCTCGGCATTCTCGCCAACGGCCAGAACGTGGCCTTCCTGGTGGCCCTGGC
GTTCGCCATCGCCGCTGCGGCCAATCTGCCGACAATTGTGTATTCGTTGTACTGGAAGCGCTTCAACACCCGCGGTGCGC
TGTGGAGCATCTATGGTGGCCTCGGTTCGACGCTGCTGCTCATCGTGTTCTCGCCCGCGGTCTCCGGTAAGGCCACCTCG
ATGATTCCCGGCGCCGACTTCGCCTGGTTCCCGTTGGAGAATCCCGGCATCGTCTCGATCCCGTTGGCCTTCGTGCTCGG
TATCGTCGGCACGCTGACCTCGCCGTCGGATCGCGGTACCCCGGAACGCAACGCCGAGATGGAGGTTCGCTCCCTGACCG
GCGTGGGCGCCGAAGAGGCGGTGGCGCACTAA

Protein sequence :
MTTLAASAAVGNPIANIAIFVAFVAITLFVVIRASKKNASATDYFTGGRAFSGPQNGIAIAGDYLSAASFLGIAGAIAVY
GYDGFLYSIGFLVAWLVALLLVAELLRNTGKFTMADVLSFRLKQRPVRLAAAISTLAVSLFYLLAQMAGAGGLVALLLDV
TSRTGQSIVIAVVGALMIVYVLVGGMKGTTWVQIIKAVLLIAGAAFMTVLVLAKFGLNVSHILGGAQDAISGSSSEKVAA
RDVLAPGAKYGGSMESQINFISLAIALVLGTAGLPHVLMRFYTVPTAKEARRSVVWAIALIGAFYLFTLILGYGAAAIVG
PDRILAAAGKENAAAPLLAFELGGTILLGIIAAVAFATILAVVAGLTITASASFAHDIYASVIKRGKVSEDDQVRVSRYA
AITLGVLGIVLGILANGQNVAFLVALAFAIAAAANLPTIVYSLYWKRFNTRGALWSIYGGLGSTLLLIVFSPAVSGKATS
MIPGADFAWFPLENPGIVSIPLAFVLGIVGTLTSPSDRGTPERNAEMEVRSLTGVGAEEAVAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 1e-117 64
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 8e-55 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_c08680 YP_005281299.1 sodium/solute symporter family protein BAC0570 Protein 3e-56 46
GPOL_c08680 YP_005281299.1 sodium/solute symporter family protein BAC0564 Protein 7e-64 45