Gene Information

Name : GPOL_c05730 (GPOL_c05730)
Accession : YP_005281008.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 677635 - 678567 bp
Length : 933 bp
Strand : +
Note : -

DNA sequence :
GTGGTGGCCATGACATCAGCGCACGCAGAGATGACGCAGCCGAGCGGCACGGCCGCCGCGGCCGGATCCGAGGGTCTGAC
CAAGGTCTACGGGTCAGGTGACACCGCCGTCCACGCGCTGCGAGGCGTGACGATCGAATTCGCGGCCGGACAGTTCACCG
CGATCATGGGTCCGTCGGGGTCGGGGAAGTCGACCCTGATGCACTGCCTCGCCGGCCTCGATGACGCCACCGGCGGCCGC
GCCTACATCGGTGACGTCGCCCTCACCGGGCTCTCCGACAAGGAGATGACCAAGCTCCGACGTGACCGCATCGGATTCGT
GTTCCAGTCGTTCAATCTGGTGCCCACCCTCACCGCGGCCGAGAACATCACCCTGCCCCTCGACATCGCCGGCCGGCCGG
TGGACAAGGAGTGGTTCGACACCGTCATCGGTCGCCTCGGCATCGGGGATCGACTCGATCACCTGCCGACCGAGCTGTCC
GGTGGCCAACAGCAGCGCGTTGCGTGTGCCCGCGCCCTGGTGGGCAAACCCGAGATCATCTTCGGTGACGAGCCGACCGG
CAACCTCGATTCCCGCTCCTCCGGAGAGGTTCTCGCGATCCTGCGCGCGGCCACCGACGAATTCGGGCAGACCGTCGTCA
TCGTCACCCACGATCCGCGCGCCGCGTCCTACGCCGACCGTGTGGTCTTTCTCGCCGACGGCAACATCGTGCGGGAGCTG
ACCCGACCGACCGCCGACGACGTCTTCGAGGTGATGCGCCACCTCGATGACAAGCCGGGGGATGACAAGCCCGGGGACGA
CAAGCCGGGGGATGAGACACCGGTCGACGGGCTCACCGGCACCACGGATTCCGGTGCAACTGCTGCCGGGCAGGCCACCG
CCCCGGTCGACCCCACCGACGGAACGCCCCGTGGGCGCCACGAGGCACGCTGA

Protein sequence :
MVAMTSAHAEMTQPSGTAAAAGSEGLTKVYGSGDTAVHALRGVTIEFAAGQFTAIMGPSGSGKSTLMHCLAGLDDATGGR
AYIGDVALTGLSDKEMTKLRRDRIGFVFQSFNLVPTLTAAENITLPLDIAGRPVDKEWFDTVIGRLGIGDRLDHLPTELS
GGQQQRVACARALVGKPEIIFGDEPTGNLDSRSSGEVLAILRAATDEFGQTVVIVTHDPRAASYADRVVFLADGNIVREL
TRPTADDVFEVMRHLDDKPGDDKPGDDKPGDETPVDGLTGTTDSGATAAGQATAPVDPTDGTPRGRHEAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-42 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-42 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-42 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_c05730 YP_005281008.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-38 48
GPOL_c05730 YP_005281008.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-45 44