Gene Information

Name : GPOL_c48170 (GPOL_c48170)
Accession : YP_005285179.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5437581 - 5438336 bp
Length : 756 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGCACCCCACACACCTGCCGTCGTCCTGCGCGACGTGTCACGCACCTACGGCGACGCCGCCAACCCCATCCACGC
ACTGCGTCACGTCTCCCTCGATCTGCATCGCCGCGAGTTCACCGCGATCATGGGGCCCTCCGGGTCCGGTAAGTCGACGC
TGATGAACGTCATCGCCGGACTCGACGACATCAGCTCCGGGCAGATCTGGCTCGGCGACACCCCGATCGCCGGACTCGAC
GACACCGCGCGAACCCTGCTGCGCCGCACCACCATCGGCTTCGTCTTCCAAGCCTTCAACCTGATTCCGACGCTCACCGC
CGACGAGAACATCCGACTTCCACTCGTACTCGCCGGGATACGACCCGATGCCACACAGCAGGCGTGGATCGCACACCTCG
TCGCGACGCTCGGCTTGCGCGACCGGCTCGATCACCTGCCGTCGGAACTATCCGGCGGACAACAACAGCGGGTTGCGATC
GTGCGTGCTCTCGCATCCCGCCCGACGATCATCCTCGCCGACGAGCCGACCGGTGCCCTCGACACCCGCACGGGCCGAGA
GGTGTTGACACTGTTGACCACCGCGGCCCGCGAATACGGTCAGGGCATCGCGATGGTCACCCACGACCCGGTGGCCGCGT
CCTACGCCGACCGGATCGTGGTACTCACCGACGGCGCGATCGCCGGCGAGTACCGGGGTCTGAATCCCCGCCAGATCTCC
GACCTGTTGATCGGGTTGCAGGAGGTTCCGGCATGA

Protein sequence : 
MNAPHTPAVVLRDVSRTYGDAANPIHALRHVSLDLHRREFTAIMGPSGSGKSTLMNVIAGLDDISSGQIWLGDTPIAGLD
DTARTLLRRTTIGFVFQAFNLIPTLTADENIRLPLVLAGIRPDATQQAWIAHLVATLGLRDRLDHLPSELSGGQQQRVAI
VRALASRPTIILADEPTGALDTRTGREVLTLLTTAAREYGQGIAMVTHDPVAASYADRIVVLTDGAIAGEYRGLNPRQIS
DLLIGLQEVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_c48170 YP_005285179.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-45 48
GPOL_c48170 YP_005285179.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-46 46
GPOL_c48170 YP_005285179.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-36 45
GPOL_c48170 YP_005285179.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-41 42