Gene Information

Name : GPOL_c46280 (GPOL_c46280)
Accession : YP_005284995.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Unknown
Product : putative aspartate aminotransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5233634 - 5234887 bp
Length : 1254 bp
Strand : +
Note : -

DNA sequence :
GTGAGTAGGCCTTACGTATCCCACCTGAACCAGAACCTCAAGCCGCTCGAGCAGTCCCTGAAGCTGCAGAACGTGTGCTA
CGAGATCAGGGGGCCGGTGCACGCGCACGCGGCCCGGTTGGAGGCCGAGGGCCACCGGATCATGAAGCTCAACATCGGCA
ACCCGGCGCTGTTCGGCTTCGAGGCTCCCGACGTCATCATGCGCGACATGATCCACGCCCTGCCCTACTCCCAGGGGTAC
TCCGAGTCCGCGGGCGTGCTGTCCGCCCGGCGGGCCGTCGTGACGCGCTATGAGCTCATCCCCGACTTCCCGTACTTCGA
CGTCGACGACGTGATCCTCGGCAACGGTGTCTCCGAGCTGATCACGATGACGATGCAGGCGCTGCTCAACGACGGCGACG
AGGTCCTCATCCCGGCACCGGACTATCCACTCTGGACCGCGATGACCGCGCTGTCCGGCGGTCAGCCGGTGCACTATCGG
TGCGACGAGAGCAACGGCTGGAACCCCGACATCGAGGACGTCGAGGCCAAGATCACCGACCGCACCAAGGCCCTTGTGAT
CATCAACCCGAACAACCCGACGGGCGCGGTTTACTCACGCGAGGTGCTCGAAAAACTGGCCGACATCGCGCGCAGGCATT
CGCTGCTGATCCTGGCCGACGAGATCTACGACAAGATCCTCTACGACGACGCCGTCCACACCAACATCGCCTCGTTGGCC
CCGGATCTGTTGTGCCTCACCTTCAATGGGCTCTCCAAGGCCTACCGCGTGTGCGGTTATCGCGCCGGCTGGGTGGTCCT
CACCGGCCCGAAGGAGCACGCGCAGGGCTTCATCGAGGGCCTCGGCATCCTCGCCTCGACGCGATTGTGTTCCAACGTGC
CCGGCCAGCACGCGATTCAGGTGGCCCTCGGCGGGTATCAGAGCATCGACGCGCTCGTCGAGCCGGGCGGACGGCTGTAC
GAGCAGCGCAACGTCACCTGGGAGAAGCTCAATCAGATCCCCGGCGTCAGTTGCGTCAAACCGAGCGGCGCGCTGTATGC
CTTCCCCCATCTCGACCCCGAGGTCCACGAGATCCACAACGATGAGCTGTTCGTCCAGGATCTTCTGCTACAGGAGAAGA
TCCTCGTGGTGCAGGGCACCGGCTTCAACCTCGACGACCACAATCACTTCCGGATCGTCACCCTGCCGTGGGCGCGTGAG
CTCGGCGAGGCGATCGAGCGGATCGGCAACTTCCTCTCCTCGTACCGCCAGTAG

Protein sequence :
MSRPYVSHLNQNLKPLEQSLKLQNVCYEIRGPVHAHAARLEAEGHRIMKLNIGNPALFGFEAPDVIMRDMIHALPYSQGY
SESAGVLSARRAVVTRYELIPDFPYFDVDDVILGNGVSELITMTMQALLNDGDEVLIPAPDYPLWTAMTALSGGQPVHYR
CDESNGWNPDIEDVEAKITDRTKALVIINPNNPTGAVYSREVLEKLADIARRHSLLILADEIYDKILYDDAVHTNIASLA
PDLLCLTFNGLSKAYRVCGYRAGWVVLTGPKEHAQGFIEGLGILASTRLCSNVPGQHAIQVALGGYQSIDALVEPGGRLY
EQRNVTWEKLNQIPGVSCVKPSGALYAFPHLDPEVHEIHNDELFVQDLLLQEKILVVQGTGFNLDDHNHFRIVTLPWARE
LGEAIERIGNFLSSYRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-141 70
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-141 70
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-141 70
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 4e-141 70