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Name : clpB (GPOL_c44240) Accession : YP_005284793.1 Strain : Gordonia polyisoprenivorans VH2 Genome accession: NC_016906 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 5020434 - 5022986 bp Length : 2553 bp Strand : - Note : - DNA sequence : GTGGACAGCTTCACCCCGACCACCAAGACACAGCAGGCGTTGAGCGCTGCGGTGCAGGCGGCGGCCGCTGCTGGTAACCC CGACGTGCGTCCCGCCCATATCCTGGTCGCTCTGCTCGACCAGTCCGACGGCATTGCCTCGCCGCTGCTCAAGGCGGTGG GGGTCGATCCGTCGACTGTTCGTACGCAGGCTCAGGGCATGGTCGATCGCGCACCGACGGTGGCCAGCGCCAGCGCTCAG CCGCAACTGTCGCGCGAGTCGATCGCCGCGGTCAGTGCCGCCCAGCAGCTCGCGACCGAATTGAACGACGAGTACGTCTC GACCGAACACCTCGTCGTCGGCCTCGCGACCGGCGACTCCGAGGTCGCCAAACTGCTGCACAACGCCGGTGCAACACCGC AGGCATTGCGTGAGGCCTTCGTCGCCGTGCGCGGCAACGCCCGCGTGACCTCCGAAGATCCGGAGTCGACCTATCAGGCG CTGGAGAAGTACTCGACCGACCTGACCAAGGCCGCCCGCGAAGGCAAACTCGACCCGGTCATCGGCCGCGACACCGAGAT CCGTCGCGTCGTGCAGGTGCTCTCCCGTCGGACCAAGAACAACCCGGTCCTCATCGGTGAGCCCGGCGTCGGCAAGACCG CCATCGTCGAGGGGCTCGCCCAGCGCATCGTCGAGGGCGATGTGCCGGAGTCGTTGCGCAACAAGACCGTCATCTCGCTG GACCTCGGTTCGATGGTTGCCGGCGCGAAGTACCGCGGCGAGTTCGAGGAGCGGCTCAAGGCCGTGCTCGACGAGATCAA GGGTTCGGCCGGTCAGGTCATCACCTTCATCGATGAGCTGCACACCATCGTCGGCGCCGGTGCCACCGGCGAATCCGCGA TGGACGCGGGCAACATGATCAAGCCGATGCTGGCTCGTGGTGAGCTGCGACTGGTCGGCGCGACCACGCTCGAGGAGTAC CGCAAGTACATCGAGAAGGACGCCGCGCTCGAGCGCCGCTTCCAGCAGGTCTACGTCGGGGAGCCGAGCGTCGAGGACGC CATCGGTATTCTTCGCGGCCTCAAGGAGCGTTACGAGGTGCACCACGGCGTGCGCATCACCGACTCCGCATTGGTGGCTG CGGCAACGCTTTCCGATCGCTACATCACCTCGCGGTTCCTCCCCGACAAGGCCATCGACCTCGTCGACGAGGCCGCCTCG CGGTTGCGGATGGAGATCGACTCGCGCCCCGTCGAGATCGACGAGGTCGAGCGTGTCGTCCGACGCCTCGAGGTCGAGGA GGTCGCGTTGGAGAAGGAGCACGACGAGGCGAGCAAGGACCGGCTGGAGAAGTTGCGTCAGGAACTGGCCGATCAGCGCG AGAAGCTCAACGAGCTCTCGGCGCGCTGGCAGTCGGAGAAGACCGCCATCGACGCCGTCCGCGACGTCAAGGAACAGCTG GAAAACCTTCGTGGAGAAGCCGATCGCGCCGAGCGTGATGGTGATCTGGGACGGGCCGCAGAGCTGCGGTACGGTCGAAT CCCGGGCCTGGAGAAGGAACTCGAGGCCGCGATCGAGAAGACCGGCACCGATCCCGACCAGGACGTGATGCTGCAGGAGG AGGTCGGTCCCGACGACGTCGCGCAGGTCGTGTCGGCGTGGACGGGTATCCCCGCGGGCAAGATGCTCGAGGGGGAAACC GCCAAACTGCTTCGCATGGAACAAGAACTCGGGCGCCGGGTCGTCGGGCAGCAGGCCGCCGTGGTGGCGGTCTCGGATGC GGTGCGTCGTGCACGCGCCGGCGTCGCCGACCCCAACCGACCGCTCGGATCGTTCCTGTTCCTCGGACCGACCGGCGTCG GCAAGACCGAGCTGGCCAAGGCGTTGGCGGAGTTCATGTTCGACGACGAGCGCGCGATGGTGCGCATCGACATGAGTGAG TACGGCGAAAAGCACGCCGTGGCACGACTTGTCGGTGCCCCTCCGGGGTACGTCGGGTACGAGCAGGGCGGACAGCTGAC CGAGGCGGTGCGTCGTCGGCCGTACACGGTGGTCCTCTTCGACGAGGTCGAGAAGGCACACCCGGACGTCTTCGACATCC TGCTGCAGGTCCTCGACGAAGGACGCCTGACCGACGGCCAGGGCCGCACAGTCGACTTCCGCAACACCATCCTGATCCTG ACCTCCAACCTGGGGTCCGGCGGCGACGCCGATCACGTGATGGCGGCGGTGCGTGCGGCGTTCAAGCCGGAGTTCATCAA TCGTCTCGACGACGTGGTGATCTTCGATGCGCTGAGCCCCGAGGAACTGGTGTCCATCGTCGACATCCAACTGGGACAGC TGCAGAAGCGGCTGGCGCAGCGTCGACTGGAACTGCAGGTCACGCCGAAGGCCAAGGAATGGCTGGCCGAGCGCGGATTC GACCCGCTCTACGGTGCCCGGCCGCTACGGCGTCTGGTGCAGCAGGCCATCGGCGACCAGCTCGCCCGAGCCCTGCTGGC CGGTGACATCCGCGACGGTGACATCGTTCCGGTCAACGTCAGCGCCGACGGAGAGTCGTTGGTGCTCGGCTGA Protein sequence : MDSFTPTTKTQQALSAAVQAAAAAGNPDVRPAHILVALLDQSDGIASPLLKAVGVDPSTVRTQAQGMVDRAPTVASASAQ PQLSRESIAAVSAAQQLATELNDEYVSTEHLVVGLATGDSEVAKLLHNAGATPQALREAFVAVRGNARVTSEDPESTYQA LEKYSTDLTKAAREGKLDPVIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVEGDVPESLRNKTVISL DLGSMVAGAKYRGEFEERLKAVLDEIKGSAGQVITFIDELHTIVGAGATGESAMDAGNMIKPMLARGELRLVGATTLEEY RKYIEKDAALERRFQQVYVGEPSVEDAIGILRGLKERYEVHHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDEAAS RLRMEIDSRPVEIDEVERVVRRLEVEEVALEKEHDEASKDRLEKLRQELADQREKLNELSARWQSEKTAIDAVRDVKEQL ENLRGEADRAERDGDLGRAAELRYGRIPGLEKELEAAIEKTGTDPDQDVMLQEEVGPDDVAQVVSAWTGIPAGKMLEGET AKLLRMEQELGRRVVGQQAAVVAVSDAVRRARAGVADPNRPLGSFLFLGPTGVGKTELAKALAEFMFDDERAMVRIDMSE YGEKHAVARLVGAPPGYVGYEQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTILIL TSNLGSGGDADHVMAAVRAAFKPEFINRLDDVVIFDALSPEELVSIVDIQLGQLQKRLAQRRLELQVTPKAKEWLAERGF DPLYGARPLRRLVQQAIGDQLARALLAGDIRDGDIVPVNVSADGESLVLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-90 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_005284793.1 | chaperone protein ClpB | VFG2084 | Protein | 1e-104 | 43 |
| clpB | YP_005284793.1 | chaperone protein ClpB | VFG2076 | Protein | 1e-102 | 41 |
