|
Name : kdpB (GPOL_c44130) Accession : YP_005284782.1 Strain : Gordonia polyisoprenivorans VH2 Genome accession: NC_016906 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit KdpB Function : - COG functional category : - COG ID : - EC number : 3.6.3.12 Position : 5009340 - 5011478 bp Length : 2139 bp Strand : - Note : - DNA sequence : GTGAGTGTGGATACGATCGACCGGACCGACGGCGGGCACAAGCCCACCGATGAGTCCGCCGACTCTCCGGAACTGGTGTC GGGCGGCGCATTCGACGCCCGCAGCCTGATCACCTCGCTGCCGCAGGCGGCGCGCAAACTGAACCCCAAGGACCAAGCCC GCAATCCGGTGATGTTTGTGGTGTTCCTCGGCGCCATCGTCACCACGGTGCTCGCGATCTGGCGGCCGTCGTGGTTCTCC TGGCTGATCGCCGCATGGCTGTGGTTCACGGTGATCTTCGCCAACCTCGCCGAGGCGGTCGCCGAGGGGCGCGGCCGTGC GCAGGCGGACAGCCTGCGAAAGGTCAAGCGAGACACCATGGCCCGACGGATCGGTGCGGACGGTTCGACGGTCTCGGTCT CGGGCAGCGATCTCGTGGTCGGCGACTGGATCATCGTCGAGGCCGGTGAGGTGATCGCCGGTGACGGCGACGTCATCGAG GGCATCGCGACCGTCGACGAGTCGGCGATCACCGGCGAATCCGCGCCGGTGGTCCGCGAATCCGGTGGTGACCGATGCGC GGTCACCGGCGGCACCGTCGTGCTGTCGGATCGCATCATCGTCAAGATAACCACCGCGCCGGGAGAGACCTTCGTCGACC GGATGATCGCGCTCGTCGAGGGGGCCGCCCGCAAGAAGACCCCCAACGAGATCGCGCTGGACATCCTGCTCGCCAGCCTG ACGGTGATCTTCCTGCTCGCCGTCGTCGCGGTCGGTCCGATGCAGCAGTACGCCGGGCAGAGCCCCGATCCGATCAAGTT GATCGCGCTGCTGGTCTGCCTCATCCCGACGACGATCGGGGCCCTGCTCTCCTCGATCGGTATCGCCGGGATGGATCGAT TGGTGCAACGCAATGTGCTGGCGATGTCGGGCCGGGCGGTCGAGGCCGCCGGTGATATCGACACCCTGCTGATGGACAAG ACCGGCACGATCACCTTCGGCAATCGGCGGGCCACCGAGATCTTCCCCGGTCCCGACACCTCCACCGCCGACCTCGCGTC CGCCGCGTATCGGTGCAGTCTCGCCGACGACACCCCCGAGGGCCGCAGCATCGTCGATCTGTGCCTGCAGGAGCATCAGG TCACCCCGATGGCCGCCGATGACGCCGACGCGGCGCGCGGTGGTGTTCATCCGAACTACGACGTCGTCGCCTTCACCGCC GAAACCCGCATGAGCGGAATCGATCTGCACGACGGCCCGTCCGACGTCGAATACCGCAAGGGCGCCGCCGACGCGGTGAC CCGCTGGATCGGCCGCCTTGGCGGCTCGGTACCGGAGGTCGTCACCGATCGCGTCGCGGAGATCTCGCAGGGTGGTGGCA CGCCGCTGCTGGTCGCCGTCCACGACGCCGACGGCGCACGCATCCTCGGTACCATCCAGCTCTCCGACGTGGTCAAGCCC GGAATGCGTTCGCGCTTTGCGCAACTGCGGGCGATGGGCATCCGCACGGTGATGGTCACCGGTGACAATCCGTTGACCGC CAAGGCGATTGCCGACGAAGCAGGCGTCGACGACTTCGTCGCCGAGGCCACCCCCGAGGACAAGCTCGCCCTGATCCGTT CCGAGCAGGCGGGTGGGCGGCTGGTCGCGATGACCGGCGACGGCACCAACGACGCGCCGGCGCTCGCGCAGGCCGACGTC GGGCTGGCCATGAACACCGGGACGTCGGCGGCCAAGGAAGCCGGCAACATGGTCGACCTCGATTCGGATCCGACCAAGCT GATCGAGGTCGTCGCCATCGGCAAGCAACTGCTGATCACCCGCGGTGCACTGACGACGTTCTCGCTGGCCAACGACCTCG CGAAGTACTTCGCGATCCTGCCGGCGATGTTCGCGGTCATCTATCCGCAACTGCACGTGCTCAACATCATGCACCTGCAT TCGGCGCAGTCGGCGATCGTCTCGGCGATCGTGTTCAACGCCCTGATCATCGTCGCGCTCATCCCGCTGTCGTTGCGTGG CGTCAAATACCGGCCCAGCTCGGCCTCGCGCCTGCTCGGCCGCAATCTACTGATCTACGGCCTCGGTGGCGTCGTGTCAC CGTTCGTCGGGATCTGGTTGATCGATCTCGTGGTCCGTTTCCTTCCGGGAATGGGGTGA Protein sequence : MSVDTIDRTDGGHKPTDESADSPELVSGGAFDARSLITSLPQAARKLNPKDQARNPVMFVVFLGAIVTTVLAIWRPSWFS WLIAAWLWFTVIFANLAEAVAEGRGRAQADSLRKVKRDTMARRIGADGSTVSVSGSDLVVGDWIIVEAGEVIAGDGDVIE GIATVDESAITGESAPVVRESGGDRCAVTGGTVVLSDRIIVKITTAPGETFVDRMIALVEGAARKKTPNEIALDILLASL TVIFLLAVVAVGPMQQYAGQSPDPIKLIALLVCLIPTTIGALLSSIGIAGMDRLVQRNVLAMSGRAVEAAGDIDTLLMDK TGTITFGNRRATEIFPGPDTSTADLASAAYRCSLADDTPEGRSIVDLCLQEHQVTPMAADDADAARGGVHPNYDVVAFTA ETRMSGIDLHDGPSDVEYRKGAADAVTRWIGRLGGSVPEVVTDRVAEISQGGGTPLLVAVHDADGARILGTIQLSDVVKP GMRSRFAQLRAMGIRTVMVTGDNPLTAKAIADEAGVDDFVAEATPEDKLALIRSEQAGGRLVAMTGDGTNDAPALAQADV GLAMNTGTSAAKEAGNMVDLDSDPTKLIEVVAIGKQLLITRGALTTFSLANDLAKYFAILPAMFAVIYPQLHVLNIMHLH SAQSAIVSAIVFNALIIVALIPLSLRGVKYRPSSASRLLGRNLLIYGLGGVVSPFVGIWLIDLVVRFLPGMG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-166 | 56 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-166 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 1e-149 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-149 | 53 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-149 | 53 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-149 | 53 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-149 | 53 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-149 | 53 |
