Gene Information

Name : GPOL_c43570 (GPOL_c43570)
Accession : YP_005284726.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Virulence
Product : putative ABC transport system, permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4946281 - 4947315 bp
Length : 1035 bp
Strand : +
Note : -

DNA sequence :
GTGCGACGCCTCACCGGACTACTGCTGATCCTCGCGGTACTCGTCGTCGCCATCATCGGGTCGGTGTTGATCGGCACGAG
AGAGATGCCGCTGGCCGCCACCTGGGATTCCTTCACCGCAGGCTGCTCGCAGATCTGGCAGGCCCTGATCCACCTGCACA
TGCCGCGGATCGACAAGTCCTCCGACACCGCGGGCATCGTCTGGGACCTGCGCGTACCGCGTACCGTGCTCGGTCTCATC
GTGGGTCTGGCCATCGGCGCGGCCGGCGCAATCACCCAGGGCCACACCCGCAACCCCATCGCCGACCCCGGGTTGCTCGG
CGTCAATGCCGGCGCAGCCTGCGCGGTCGTCGGCGGTGTCTACCTGTTCGGCATCTCCTCGCCGCTGGCCTACATGGCAT
TCGGGCTCGGCGGCGCGATCATCGCCTCGGCCCTCGTCTTCGGGATCGCGGCACTGACCGGGACGGGTCCGATCACCCTC
GTGCTGGCGGGCACCGGTCTGTCGGCGATGCTCGTGGCGATCACCTCGGCGATCGTGCTCAGCGACACCGCGTCGCTCGA
CGCGTGGCGTTTCTGGAGCGTCGGTTCGACGGCCGGCCGCAGCATCGACATCTTCTGGGCCGCATTGCCGTTCATCGGGG
TCGGTCTCGTGCTGGCGCTGGCGTCGGGGTTCTTCCTCAACATCCTGAGCCTCGGCGACGACATGACCAAGGCGCTCGGC
AGCCGCGTGTTGGTGATCCGCGGCGTCGGCATCCTCGGGATCACCCTGCTGATCGGGGCGGCGACCGCCGCCTGCGGACC
CATCGTCTTCCTCGGTCTGGTGGTGCCGCACATCGCGCGCGCGATCACCGGCGCCGACTATCGCTGGATCATCCCGTACT
CGGCGCTCATCGGCGCCGCGCTGTTGTTGGTGTGCGACATCATCGGTCGCGTCGTCGCCCGGCCCGGCGAGATCCAGGTC
GGCGTCGTGCTGGCCTTCGTCGGGGCGCCGTTCCTGATCGCCATGGTCCGCCGGACGAAGTTGACGAGCGTATGA

Protein sequence :
MRRLTGLLLILAVLVVAIIGSVLIGTREMPLAATWDSFTAGCSQIWQALIHLHMPRIDKSSDTAGIVWDLRVPRTVLGLI
VGLAIGAAGAITQGHTRNPIADPGLLGVNAGAACAVVGGVYLFGISSPLAYMAFGLGGAIIASALVFGIAALTGTGPITL
VLAGTGLSAMLVAITSAIVLSDTASLDAWRFWSVGSTAGRSIDIFWAALPFIGVGLVLALASGFFLNILSLGDDMTKALG
SRVLVIRGVGILGITLLIGAATAACGPIVFLGLVVPHIARAITGADYRWIIPYSALIGAALLLVCDIIGRVVARPGEIQV
GVVLAFVGAPFLIAMVRRTKLTSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 6e-20 42
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 6e-20 42
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 6e-20 42
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 6e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_c43570 YP_005284726.1 putative ABC transport system, permease protein VFG0926 Protein 2e-23 45