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Name : GPOL_c41900 (GPOL_c41900) Accession : YP_005284562.1 Strain : Gordonia polyisoprenivorans VH2 Genome accession: NC_016906 Putative virulence/resistance : Virulence Product : putative ATP-dependent Clp protease, ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 4764969 - 4767512 bp Length : 2544 bp Strand : - Note : - DNA sequence : ATGTTCGAACGGTTCACCGACCGCGCTCGGCGGGTTGTCGTGCTCGCCCAAGAAGAGGCGCGGATGCTCAACCACAACTA CATCGGCACCGAGCACATCCTGCTCGGCCTGATCCACGAGGGCGAAGGCGTCGCCGCCAAGGCCCTCGAATCGCTCGGCA TCTCCCTGGAAGGGGTCCGCAGTCAGGTCGAGGAGATCATCGGTCAGGGCCAGCAGGCGCCGTCGGGGCACATCCCGTTC ACCCCGCGCGCCAAGAAGGTCCTCGAGCTCTCGCTGCGTGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTGCTCGGCCTCATCCGCGAGGGTGAGGGCGTCGCCGCACAGGTGCTCGTCAAGCTGGGCGCCGACCTTAACCGGG TGCGCCAGCAGGTCATCCAGCTGCTGTCGGGTTACCAGGGCAAGGAGCCGCAGGAGGCCGGCACGGGTGGCCGGTCCAGC GAGTCCGGCACCCCGTCGACGTCGCTGGTCCTCGACCAGTTCGGCAGAAACCTGACCGCCGCGGCCGCCGAGGGCAAACT CGACCCCGTCATCGGCCGCGAGAAAGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGCACCAAGAACAACCCGGTGC TGATCGGCGAGCCCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTCGCGCAGGCGATCGTCAACGGCAAGGTGCCCGAG ACGCTCAAGGACAAGCAGCTCTACACCCTCGACCTCGGATCGCTGGTGGCGGGCAGCCGCTACCGCGGTGACTTCGAGGA ACGCCTCAAGAAGGTCCTCAAGGAGATCAACACCCGCGGTGACATCATCCTGTTCATCGACGAGCTGCACACGCTCGTCG GTGCCGGTGCCGCCGAGGGCGCGATCGACGCCGCCAGCATCCTCAAGCCGAAGCTGGCCCGCGGTGAGCTGCAGACCATC GGTGCCACCACCCTCGACGAGTACCGCAAGTACATCGAGAAGGACGCCGCACTCGAGCGCCGGTTCCAGCCGGTGCAGGT CGGCGAGCCGTCGGTGGAGCACACCATCGAGATCCTCAAGGGTCTGCGCGACCGCTACGAGAGCCACCACCGCGTGTCCA TCACCGACGGTGCGCTCGTCGCCGCGGCCACTCTGGCCGACCGCTACATCAACGACCGGTTCCTGCCGGACAAGGCGATC GACCTCATCGACGAGGCCGGTGCGCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGCG CATCGCCGACGCCCGCAAGGAGAAGGAAAGCGCCATCGACGCGCAGGACTTCGAGAAGGCCGCCGGCCTGCGGGACAAGG AGAAGCAACTCGTCGCCGAGCGTGCCGAGCGTGAAAAGCAATGGCGCAGTGGTGATCTGGACGTCGTGGCCGAGGTCGAC GACGAGCAGATCGCCGAGGTGCTGGGCAACTGGACCGGTATCCCGGTGTTCAAGCTCACCGAGGAGGAGACCACGCGTCT GCTCCGCATGGAGGACGAGCTGCACAAGCGGATCATCGGCCAGGAGGACGCGGTCAAGGCCGTCTCCAAGGCGATCCGTC GTACCCGCGCGGGTCTCAAGGACCCCAAGCGCCCGTCCGGCTCGTTCATCTTCGCCGGCCCGTCCGGTGTGGGTAAGACC GAGCTGTCCAAGGCGCTCGCGAACTTCCTGTTCGGCGAGGACGACGCCCTGATCCAGATCGACATGGGCGAATTCCACGA CCGCTTCACCGCGTCGCGCCTGTTCGGTGCCCCTCCCGGCTACGTCGGCTACGAAGAGGGCGGCCAGCTCACCGAGAAGG TGCGCCGCAAGCCGTTCTCGGTGGTCCTGTTCGACGAGATCGAGAAGGCCCACTCGGAGATCTACAACACCCTGTTGCAG GTTCTCGAGGACGGTCGTCTCACCGACGGCCAGGGTCGCACGGTCGACTTCAAGAACACGGTGCTGATCTTCACCTCGAA CCTCGGTACCGCCGACATCTCGAAGGCCGTGGGACTGGGCTTCAGCAAGGGTGACGACTCGAAGTCGAACTACGAGCGGA TGAAGCTGAAGGTCAACGACGAGCTGAAGAAGCACTTCCGCCCGGAGTTCCTGAACCGTATCGACGACGTCATCGTCTTC CACCAGCTGACGAAGGACGAGATCATCCAGATGGTCGATCTGATGATCAACCGCGTCGAGACGCAGCTCAAGAACAAGGA CATGGCGATCGAGCTCACCGATCGGGCCAAGTCGTTGCTGGCCAAGCGCGGCTTCGACCCGGTGCTCGGTGCCCGGCCGC TGCGTCGGACGATCCAGCGCGAGATCGAGGATCAGTTGAGCGAGAAGATCCTGTTCAACGAGCTGACCCCGGGACAGATC GTGCTGGTCGACGTCGACAACTGGGACGGCGAAGGCGAGGGCGAGGACGCCAAGTTCACCTTCACCGGCTCGGAGAAGCC GCGTGAGCTGCCCGACGCCCCGGTCGAGCTGAGCAAGGCAGGTGACGCCGGCAGCGAGAGCTGA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEPQEAGTGGRSS ESGTPSTSLVLDQFGRNLTAAAAEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGKVPE TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI GATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYINDRFLPDKAI DLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAIDAQDFEKAAGLRDKEKQLVAERAEREKQWRSGDLDVVAEVD DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT ELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHSEIYNTLLQ VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTADISKAVGLGFSKGDDSKSNYERMKLKVNDELKKHFRPEFLNRIDDVIVF HQLTKDEIIQMVDLMINRVETQLKNKDMAIELTDRAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFNELTPGQI VLVDVDNWDGEGEGEDAKFTFTGSEKPRELPDAPVELSKAGDAGSES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 82 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GPOL_c41900 | YP_005284562.1 | putative ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 61 |
| GPOL_c41900 | YP_005284562.1 | putative ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0080 | Protein | 2e-147 | 50 |
