Gene Information

Name : GPOL_c41580 (GPOL_c41580)
Accession : YP_005284530.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.-
Position : 4730668 - 4732155 bp
Length : 1488 bp
Strand : +
Note : -

DNA sequence :
ATGACGGCAGTGGACATCGACGGTTCGGCCACCCACCTACCCGCGGGCACCGAGACGAGGCTTTTCATCGGAGGTGCCTG
GCGCGCGGCCTCCGACAGCCAGACCTTCACCGACCTGAACCCGGCGACCGGTCGGCCGCTGGTCGACGTCGCCGCGGGCT
CGGCCGCCGACATCGATGACGCGGTCCGCGCGGCCCGTGCCGCGCTGTCGGGCAGTTGGGCCGCCACCCCCGGCGCGGCC
CGCGGCGCACTGCTCAACCGGGTGGCCGACCTCATCGAGCGTGATGCCGACATCCTGGCCCGTCTCGAGTCGCTCGACAT
CGGCAAGCCGATCGGCCAACCGGCCATGCTCGACGTCCCCAACGCGGCGGCCACGTTCCGTCACTTCGCGGGCTGGGCCG
ACAAGATCACCGGTCAATCGATCCCCACCGCCGGCTACTTCGGGCGGCCGACGCACTCCTACACCGTGCGCGAGCCGGTC
GGTGTGATCGGCGCGATCATCCCGTGGAACACCCCGCTGATGATCGCCGCATGGAAGCTCGCACCCGCCCTGGCGGCCGG
GAACACCGTCGTGGTGAAGCCCCCGGAGGATGCACCACTGTCGATCCTGCATCTGGCATCGCTACTCGCCGAGGCCGGAC
TGCCCGACGGTGTCGTCGGCGTCGTTCCCGGACTGGGCCAGGTGGCGGGTGAGGCGTTGACCGCGCATCCCGACGTCGAC
AAGATCAGCTTCACCGGAAGTCCGCGGGTGGGTCGCCACATCCTCAAGGTGGCCGCCGACACCTTCAAGCGCACCACGCT
CGAACTCGGCGGCAAGTCACCGCAGATCATCCTCGCCGACGCCGACGCCGAGGCCGCGATCAACGGCACCGCCATGGGGC
TGTTCTTCAATCAGGGCGAGGTGTGCGCCGCCGGAACCCGTGTGCTGGTGCATCGTTCGCACTACGACGCGGTGGTCGAG
GGACTCGCCGGCGCCGCGGCCGCGCAGGTCCTCGGCGACCCGTTGGATCCGGCCACCACCATGGGCGCGTTGGTCAACGC
GAAACAGCAGGCCACCGTGCTGGACTACATCGCGTCCGGCCGGTCCGAGGGGGCACGACTCGTCGCGGGCGGCGAGCGTG
GCGGGGAGTCCGGATTCTTCGTGCAGCCCACCATCTTTGCCGACGCCACCAACGACATGCGGATCGCCCGCGAGGAGATC
TTCGGGCCGGTTGGCACGGTGATCGCGTTCGACGAGCCGGACGAGGCGATCGCACTGGCCAACGACACCGATTACGGTCT
CGCCGCGAGCATCTGGACATCGGATGTGGCCCAGGCGCATTCGCTGGCGGCGCGGGTACGCGCCGGAGCAGTCTGGGTCA
ACGGGTGGGCGGCGATCGACCCGGCGTTGCCCTGGGGCGGCATGAAGACCAGCGGTGTCGGCCGTGAGCTCGGGTGGGCG
GGCATCGTCGCGAACACCGAGGAGAAGGTCGTCACCGTCGTTCTCTGA

Protein sequence :
MTAVDIDGSATHLPAGTETRLFIGGAWRAASDSQTFTDLNPATGRPLVDVAAGSAADIDDAVRAARAALSGSWAATPGAA
RGALLNRVADLIERDADILARLESLDIGKPIGQPAMLDVPNAAATFRHFAGWADKITGQSIPTAGYFGRPTHSYTVREPV
GVIGAIIPWNTPLMIAAWKLAPALAAGNTVVVKPPEDAPLSILHLASLLAEAGLPDGVVGVVPGLGQVAGEALTAHPDVD
KISFTGSPRVGRHILKVAADTFKRTTLELGGKSPQIILADADAEAAINGTAMGLFFNQGEVCAAGTRVLVHRSHYDAVVE
GLAGAAAAQVLGDPLDPATTMGALVNAKQQATVLDYIASGRSEGARLVAGGERGGESGFFVQPTIFADATNDMRIAREEI
FGPVGTVIAFDEPDEAIALANDTDYGLAASIWTSDVAQAHSLAARVRAGAVWVNGWAAIDPALPWGGMKTSGVGRELGWA
GIVANTEEKVVTVVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-58 47
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-59 42
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-49 42
aldA ACK75580.1 aldehyde dehydrogenase Not tested VPI Protein 6e-32 41
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 8e-33 41
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 2e-32 41
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 2e-32 41
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 2e-32 41
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 1e-32 41
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 1e-32 41
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 1e-32 41
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 1e-57 41
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_c41580 YP_005284530.1 aldehyde dehydrogenase VFG0082 Protein 3e-59 42