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Name : GPOL_c38590 (GPOL_c38590) Accession : YP_005284236.1 Strain : Gordonia polyisoprenivorans VH2 Genome accession: NC_016906 Putative virulence/resistance : Unknown Product : putative ABC peptide transporter, ATP-binding component Function : - COG functional category : - COG ID : - EC number : - Position : 4399411 - 4401012 bp Length : 1602 bp Strand : - Note : - DNA sequence : ATGAGTCCGGTATCCGATCTCCCTGTCCTCGACGTGACCGATCTGCGCGTGGCGTACCGAACCAACGGCATCGAGACCGA GGCGGTCCGCGGAGTCGATCTCACGGTGGCGCGGGGCGAGACCGTTGCCGTGGTCGGTGAGTCAGGATCCGGGAAATCAT CGGTGGCGCAAGCGATCATCGGACTCCTACCGCGCACGGCGCACTCCACCGGCCGCGTGCACCTCGGAGATCTGCGGATC GACGAGCTCGGTTCCCGCGCCATGAACCGGATTCGGGGCGCACGGATCGGCCTGGTTCCGCAAGACCCGGGCACCGCACT CAATCCCGTGCAACGCGTGGGTGATCAGGTCGCCGAAGTCCTGCACATCCACGGTCGCGCCGCCCGAAAGACGGCCCGCA TCCACGCGCTCGAGCACCTCGCCGACGCCGGCATCGACGATCCGGAGGTGCGTTACCATCAACTACCGCACCAACTCTCG GGCGGACAACGGCAGCGTGTGCTGATCGCGATGGCGATGGCGTGCGAACCCGAGCTGATCATCGCCGACGAACCCACGAG CGCCCTCGACGTCACCGTGCAGCGCCGCATCCTCGATCACCTTGCCGCCCGCGCCGCCGATAGCGGCACCTCGATCCTGT TGATCACCCATGACATCGGGGTGGCCGCCGACCGCGCCGATCGGCTCGTCGTCATGTCCGGCGGACAGATCGTCGAAAGT GGTCCGACAGCACAGGTTCTCACCGAGCCTCGCCATGCCTACACCCGGCGACTGATCGCCGACGCACCGGCACTCACCTC GGGCACGCTGGCCCCACCCCGCGACGACGATGCACCGGTCGTCGCACGTGCCGAACACATCTCGAGGTCGTTCCGGATCG GTCGCGGCAACGGGTTGACCGCCGTCGACGACGTGTCGCTGGCGGCACGCGCCGGGCAAACCCTGGCGGTGGTGGGGGAG AGCGGGTCGGGCAAGACGACCACCGCCCGCATCCTGGCCGGTCTGGAGACCCACGAATCCGGCCTCGTCGAGGCCGGTGA TCGTCGCGGCGATGTCGGCTTCGTCTATCAGAACCCCTTCTCGTCGATGAACCCGAAACTGACTGTCGAACAGATCATCT CCGAACCGTTGCGTGGGGTCCCCCGAGCACAGCGCCGACATCGCGTGGACGAACTCCTCGCGGCGGTCGCACTCGAACCG GGTCATGCGCGCCGCCTGCCCACCGCGCTGTCGGGTGGGCAGCGGCAGCGGGTGGCGATCGCGCGTGCCCTGGCCACCAC CCCGAAGCTACTCATCCTGGACGAGCCGGTCTCCGCGCTCGACGTCACCATCCAGGCGCAGGTCCTGCGACTGCTCGCCG ATCTTCAACGCCACCATGGCATCGCCTATCTGTTCATCTCGCACGACCTGGCCGTCGTCCGGCAGATCAGTCACCGGGTG GCGGTCATGCGTGCCGGCCGCATCGTCGAGGAGGGGACGGTCGAGGAGGTCTTCGACGATCCGCGCCACGACTACACCCG TGCGCTCCTCGCCGCCATCCCCGGAGCGGGCCGTACCCCCGGTTCCGCCACCAACCTCCCCAAGGAGTCCGCTCATGCCT GA Protein sequence : MSPVSDLPVLDVTDLRVAYRTNGIETEAVRGVDLTVARGETVAVVGESGSGKSSVAQAIIGLLPRTAHSTGRVHLGDLRI DELGSRAMNRIRGARIGLVPQDPGTALNPVQRVGDQVAEVLHIHGRAARKTARIHALEHLADAGIDDPEVRYHQLPHQLS GGQRQRVLIAMAMACEPELIIADEPTSALDVTVQRRILDHLAARAADSGTSILLITHDIGVAADRADRLVVMSGGQIVES GPTAQVLTEPRHAYTRRLIADAPALTSGTLAPPRDDDAPVVARAEHISRSFRIGRGNGLTAVDDVSLAARAGQTLAVVGE SGSGKTTTARILAGLETHESGLVEAGDRRGDVGFVYQNPFSSMNPKLTVEQIISEPLRGVPRAQRRHRVDELLAAVALEP GHARRLPTALSGGQRQRVAIARALATTPKLLILDEPVSALDVTIQAQVLRLLADLQRHHGIAYLFISHDLAVVRQISHRV AVMRAGRIVEEGTVEEVFDDPRHDYTRALLAAIPGAGRTPGSATNLPKESAHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-105 | 47 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-80 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-80 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-80 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-80 | 44 |
