Gene Information

Name : GPOL_c31960 (GPOL_c31960)
Accession : YP_005283577.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Virulence
Product : resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3603571 - 3604083 bp
Length : 513 bp
Strand : +
Note : -

DNA sequence :
TTGGACGGGGTTTACCTCGACAAGACATTCACCGACCACGCGAGCGGCAAAGACGCCGACCGCCCGCAGCTCGTCGCGTG
CCTCGACTACCTGCGCGAGGGCGACGAGCTGATCGTGCACTCGATGGACCGGCTCGCCCGTAACGTTGAGGATCTGCGCC
GGATCGTGCGCGACCTGACCGGCCGGGGCGTGCGGGTGCGGTTCATCAAGGAGGGGCTGACCTTCACCGGCGAGGACTCA
CCCATGAGTCAGCTACTGCTCACGATGCTCGGGGCGGTGGCCGAGTTCGAGCGCTCGCTCATCCTCGAACGCCAGCGCGA
GGGCATCGCCGTCGCCAAGGCCGAGGGAAAGTACAAGGGCCGCAAGCCCGTTCTCTCCCCGGCCCAGGCTCAGCAGGTCG
CCGACCGGCTGGCCGGGGGAGAGTCGGCGACGGCGCTGGCCGCTGAGTACGGCGTGAGCCGGGCGACGGTCTACAACGCG
CGGCAGCGCCTCGCGAGCAGCATCGCCCAGTGA

Protein sequence :
MDGVYLDKTFTDHASGKDADRPQLVACLDYLREGDELIVHSMDRLARNVEDLRRIVRDLTGRGVRVRFIKEGLTFTGEDS
PMSQLLLTMLGAVAEFERSLILERQREGIAVAKAEGKYKGRKPVLSPAQAQQVADRLAGGESATALAAEYGVSRATVYNA
RQRLASSIAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 3e-43 61
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 2e-42 58
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 2e-42 58
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 3e-42 58
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 2e-42 57
res YP_005124341.1 DNA-invertase Not tested Not named Protein 1e-24 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_c31960 YP_005283577.1 resolvase VFG1030 Protein 8e-43 58