Gene Information

Name : GPOL_c31670 (GPOL_c31670)
Accession : YP_005283548.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3572838 - 3573758 bp
Length : 921 bp
Strand : +
Note : -

DNA sequence :
ATGATCTCCATGATCACAGTGGAGAACCTCAGCAAACGCTACGGCGAGTACGTCGCCGTCGACAACGTGTCCTTCGCGTG
CCGCCCGGGGCAGGTGACCGGCTTCCTCGGACCGAACGGAGCGGGCAAGTCCACCACCATGCGGGTGATGACCGGACTGA
CCCCGGCGACGTCGGGCTCGGTGACGATCGACGGGCAGGCCTATCGCGACATCCCCAATCCCGCCACCGAGGTCGGCGTA
CTCCTCGACGCGTCCGCACAGCACGCCGGACGCACCGGCGAGGAGATCCTGCGCCTGACCGCGATGACCATCGGGGTGCC
CCGCACCCGGGTCGATGAGATGCTCGAACTGGTCAACCTGACACCGCAGGAAGCCGGCCGGCGGGTCCGCAACTATTCCC
TCGGTATGCGGCAGCGACTCGGAATCGCCAACGCGCTCATGGGCGATCCGCGGGTGTTGATCCTCGACGAACCCGCCAAC
GGCCTCGACCCCGCGGGCATCCACTGGATGCGCAGCCTGCTGCGCGGCTACGCCGATCGTGGCGGCACCGTGTTGCTGTC
CTCGCATCTGCTGCACGAGATCGAGATCGTCGCCGACGACCTCGTCGTCATCGGCAACGGACGCATCGTCGCGCAGGGCA
CCAAGGCCGAGTTGCTCGCAGGCACCGGAACCACGGTGCGCTCGCTCGACGACCGGGCCCTCGCCGACGCGCTCGACGCC
TCGGGCATCAGCGCGCAGCCGCAGTCCGGCGGCGGACTGTCCACCGACGCCGCCCCCGAGGAGGTGGGGCGGGTCGCCGC
GGCGAACGCCATCGTGCTCACGGAGTTGCGCGCCGGCGACGGCGCCAAACTCGAGGAGATGTTCCTCGAACTGACCGCCT
CCACCCAACGCGAACAACCGATGACCGCAGGAGCATTCTGA

Protein sequence :
MISMITVENLSKRYGEYVAVDNVSFACRPGQVTGFLGPNGAGKSTTMRVMTGLTPATSGSVTIDGQAYRDIPNPATEVGV
LLDASAQHAGRTGEEILRLTAMTIGVPRTRVDEMLELVNLTPQEAGRRVRNYSLGMRQRLGIANALMGDPRVLILDEPAN
GLDPAGIHWMRSLLRGYADRGGTVLLSSHLLHEIEIVADDLVVIGNGRIVAQGTKAELLAGTGTTVRSLDDRALADALDA
SGISAQPQSGGGLSTDAAPEEVGRVAAANAIVLTELRAGDGAKLEEMFLELTASTQREQPMTAGAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 7e-44 44
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 8e-39 43
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 8e-39 43
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 1e-44 41
cdd4 CAA63569.1 - Not tested PaLoc Protein 6e-34 41