Gene Information

Name : pyk (GPOL_c27000)
Accession : YP_005283087.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Virulence
Product : pyruvate kinase Pyk
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 3059155 - 3060597 bp
Length : 1443 bp
Strand : -
Note : -

DNA sequence :
GTGAGCACCGTGACACGTCGTACCAAGATCGTCTGCACCCTGGGTCCCGCCACCAACTCCGAGGAGCGTCTCAAAGAGCT
CGTCGAGGCGGGCATGGATGTTGCTCGACTCAACTTCAGCCATGGCAGCCATGAGGACCATCGCACCGTCTACGAACGTG
TGCGTCGCGCGGGCGATGCCGCGGAGAAGGCCGTGGGCATTCTCGCCGACCTACAAGGACCCAAGATCCGACTCGGCAAA
TTCGTCGACGACGGCGCACTCAACGGCCAGGTCATGTGGGCCACCGGAGAAGAGGTCCGCATCACCGTCGACGACGTCGT
CGGCACCCACGACCGCGTCTCGACCACCTACAAACAACTCGCCGAAGACGCCGAAGCCGGAGACCGCCTCCTCGTCGACG
ACGGCAAGGTCGGACTGAAGGTCACCGCGATCGACGGCAACGACGTCGTCTGCGTGGTCACCGAAGGCGGCCCGGTCAGC
AACAACAAAGGCCTGAACCTGCCGGGCGTCAAGACCTCGATCCCCGCCCTGAGCGAAAAGGACATCGCCGACCTCGAGTT
CGCACTGCAACTCGGCGTCGACCTCGTCGCACTCTCCTTCGTGCGCAGCCCGGCCGACATCGAACTCGTCCACGAAGTGA
TGGACCGCGTCGGACGCCGCGTCCCGGTGATCGCCAAACTGGAAAAGCCCGAAGCCGTCGACAACCTCGAAGCCATCGTG
CTGGCCTTCGACGGTGTCATGGTCGCCCGCGGTGACCTGGGCGTGGAACTGCCGCTCGAGCAGGTTCCCCTCGTGCAGAA
GAAAGCCATCCAGATGGCTCGCGAGAACGCCAAACCGGTGATCGTGGCCACCCAGATGCTGGACTCGATGATCGAGAACT
CCCGGCCCACCCGCGCCGAGGCCTCCGACGTCGCCAACGCCGTCCTCGACGGTGCCGACGCCGTGATGCTCTCCGGCGAG
ACCTCCGTCGGCAAATGGCCGATCGAGACCGTGCAGACGATGACCCGCATCTGCGTGGCAGTCGAAACCGGCTCACGTGA
CGTGCCCCCGCTCTCCCACGTCCCCCGCACAAAACGCGGCATCATCTCCTACGCCGCACGCGACATCGGAGAACGCCTCG
AGGTCAAGGCCATGGTGGCGTTCACCCAGTCCGGCGACACCGTCCGCCGACTGGCGCGGCTGCACTCCCGCCTGCCGCTG
CTCGCGTTCACACCCACCCAGGCCGTACGCAGCCAACTCGCCCTGAGCTGGGGAACCGAGACCTTCATCGTCGATCACGT
CGACACCACCGACCACATGATCGACCAGGTCGACCACCAGCTGCTGCGCATCGGTCGGCTCAAGGACGGCGACGTCGTCG
TCATCGTCGCCGGCGCGCCGCCCGGCACCGTCGGATCGACCAACATGATCCACGTCCACCGGATCGGCGAACAGGACCAC
TGA

Protein sequence :
MSTVTRRTKIVCTLGPATNSEERLKELVEAGMDVARLNFSHGSHEDHRTVYERVRRAGDAAEKAVGILADLQGPKIRLGK
FVDDGALNGQVMWATGEEVRITVDDVVGTHDRVSTTYKQLAEDAEAGDRLLVDDGKVGLKVTAIDGNDVVCVVTEGGPVS
NNKGLNLPGVKTSIPALSEKDIADLEFALQLGVDLVALSFVRSPADIELVHEVMDRVGRRVPVIAKLEKPEAVDNLEAIV
LAFDGVMVARGDLGVELPLEQVPLVQKKAIQMARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGE
TSVGKWPIETVQTMTRICVAVETGSRDVPPLSHVPRTKRGIISYAARDIGERLEVKAMVAFTQSGDTVRRLARLHSRLPL
LAFTPTQAVRSQLALSWGTETFIVDHVDTTDHMIDQVDHQLLRIGRLKDGDVVVIVAGAPPGTVGSTNMIHVHRIGEQDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-76 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 5e-77 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 5e-77 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-76 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_005283087.1 pyruvate kinase Pyk VFG0479 Protein 2e-77 42