|
Name : GPOL_c26620 (GPOL_c26620) Accession : YP_005283049.1 Strain : Gordonia polyisoprenivorans VH2 Genome accession: NC_016906 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 3020523 - 3021476 bp Length : 954 bp Strand : - Note : - DNA sequence : GTGGACTTCATCCGCACCCACCAGGGACATCGGGTGGGTGCGGATGGTCTTATCTGGGGTGTCGATTCGATGTGCGCCGT GCTCTCTGAGCACGGCTGGCGCATCGCCCCGTCCACATACTACGACCACATCAACCGCGGGCCGAGCGCCCGTATGCTCG CTGACGCGCAGGTCATCGATGCGATCTTCATGCTCCGCAAGAACAAACCCCTGACCCGCGTTCTGGGCTCACGAAAGACA TGGATAATGCTGCGCAGCAACGGATTAGATGTCGCCCGTTGCACGGTTGAACGGGTCATGCGGGAGATGGGATGGCACGG CGCGATCAAGAAGAAACGGGTGCGCACGACCATCCCTGACGCGGCGGCCAAGCGGCCGACGGATCTGGTCGACCGGCAGT TTTATGCCGCGGCACCCAACCGCCTGTGGGTGGCCGATTTCACCTACTGCCGCACCGAATCCGGTTGGGCGTACACAGCC TTCGTGACTGACGTGTTCGCCCGCAAGATCGTCGGCTGGAAGGTGGCCACGGAGATGACGGTGAACTTGGTGACCGATGC GATCAACAATGCGATCGACAACAGAAAACGTTGCGGGGTAGTCGATTTGAGCAAACTCGTCCATCATAGCGACGCCGGAT CGCAGTATACTGCCATCGTGTTCGGGCAGCGATTGGCCGAGGAAGGGATCGCGGCCTCTATCGGCACCGTCGGGGACAGT TTCGACAATGCCCTGGCCGAATCGGTGAACTCGGACTACAAGAACGAACTGGTCGACAACCAGCCCCTGTTCCATGGAGC CACTGAGTTGTCGCTGGGCACCGCCGAATGGGTGGCGTTCTACAACCGAGAACGACCACACAGCTACTGCCACGACCTCA CCCCCGACCGGGCAGAGCAACTCCACTACGATCGCATGCGCACCCTCAATCCGGAGGAAGCGCTCACACCATGA Protein sequence : MDFIRTHQGHRVGADGLIWGVDSMCAVLSEHGWRIAPSTYYDHINRGPSARMLADAQVIDAIFMLRKNKPLTRVLGSRKT WIMLRSNGLDVARCTVERVMREMGWHGAIKKKRVRTTIPDAAAKRPTDLVDRQFYAAAPNRLWVADFTYCRTESGWAYTA FVTDVFARKIVGWKVATEMTVNLVTDAINNAIDNRKRCGVVDLSKLVHHSDAGSQYTAIVFGQRLAEEGIAASIGTVGDS FDNALAESVNSDYKNELVDNQPLFHGATELSLGTAEWVAFYNRERPHSYCHDLTPDRAEQLHYDRMRTLNPEEALTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp7109-25 | YP_001800853.1 | transposase for insertion sequence | Not tested | Not named | Protein | 8e-39 | 45 |
| unnamed | AAL67398.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 8e-39 | 44 |
| IS629 | CAI43909.1 | transposase for IS629 1 | Not tested | LEE | Protein | 1e-36 | 43 |
| c5178 | NP_757026.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 3e-38 | 43 |
| IS629 | CAC37926.1 | transposase for IS629 | Not tested | LEE | Protein | 1e-36 | 43 |
| IS629 | CAI43821.1 | transposase for IS629 | Not tested | LEE | Protein | 1e-36 | 43 |
| ECO111_3721 | YP_003236061.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 4e-38 | 43 |
| ECO111_3776 | YP_003236111.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 4e-38 | 43 |
| c5213 | NP_757061.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 3e-38 | 43 |
| IS629 | CAI43840.1 | transposase for IS629 | Not tested | LEE | Protein | 2e-36 | 41 |
| Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 5e-38 | 41 |
| Z1660 | NP_287162.1 | transposase for IS629 | Not tested | TAI | Protein | 5e-38 | 41 |
| ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 1e-36 | 41 |
| CDCE8392_1958 | YP_005134489.1 | transposase-like protein | Not tested | Not named | Protein | 1e-29 | 41 |
| ORF_34 | AAZ04444.1 | putative IS629 transposase | Not tested | PAI I APEC-O1 | Protein | 4e-37 | 41 |
| APECO1_3499 | YP_854312.1 | transposase for IS629 | Not tested | PAI I APEC-O1 | Protein | 6e-37 | 41 |
