Gene Information

Name : istB1 (GPOL_c25600)
Accession : YP_005282953.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Unknown
Product : insertion sequence IS21 putative ATP-binding protein IstB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2911039 - 2911686 bp
Length : 648 bp
Strand : +
Note : -

DNA sequence :
ATGGCCACCACACGTCCCAGCGCACCCTCTGATGCCGACAAGTTGATCGCCCATCAATCCAGGCTCCTCAAAGCACCGCG
GATCGCCCAGAACTATGCCCGGATCGCCGAGCAAGGCCGGGCCGCGGGTTGGCCGTTGGAGGACTATCTGGCCGCCGTGC
TCGCGGTGGAGTCCAATGCCCGCGCCGAATCGGGTGCGCGCCTTCGTATTCGAGCCGCGGGGTTCCCGGCGATCAAGACG
ATCGCCGATTTCGATTTCACCGCCCAACCCGCGGTGGACCGCGCCCAAATCGCCCGCCTCGAAGCCGGTGGCTGGATTTC
CGAAGCACGTAACATCGTCCTCCTCGGACCGCCGGGCACCGGGAAAACCCATCTCGCGACCGCGCCGGCCGTGGCCGCCG
CCCACACCGGCTATCGGGTCGGGTTCGCCTCGGCGACCGCATGGATCACCCGGCTGGCCCAGGCCCACCGCCTCGAGCGG
CTCGACGCCGAGCTCAAGAAGATCAGCCGGATCGGGCTCATCGTGATCGACGAAGTCGGCTACATTCCCTTCGATGCCGA
AGCGGCCAACCTGTTCTTCCAACTGGTCTCGAGTCGATACGAGAAGTCGTCGATCATCTTGACCTCCAACCTGCCGTTCT
CGCGGTGA

Protein sequence :
MATTRPSAPSDADKLIAHQSRLLKAPRIAQNYARIAEQGRAAGWPLEDYLAAVLAVESNARAESGARLRIRAAGFPAIKT
IADFDFTAQPAVDRAQIARLEAGGWISEARNIVLLGPPGTGKTHLATAPAVAAAHTGYRVGFASATAWITRLAQAHRLER
LDAELKKISRIGLIVIDEVGYIPFDAEAANLFFQLVSSRYEKSSIILTSNLPFSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 5e-31 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 7e-31 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 7e-31 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 7e-31 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 7e-31 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 9e-31 41
unnamed CAA21402.1 - Not tested HPI Protein 9e-31 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 7e-31 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 7e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istB1 YP_005282953.1 insertion sequence IS21 putative ATP-binding protein IstB VFG1663 Protein 3e-31 42
istB1 YP_005282953.1 insertion sequence IS21 putative ATP-binding protein IstB VFG1515 Protein 3e-31 41
istB1 YP_005282953.1 insertion sequence IS21 putative ATP-binding protein IstB VFG1627 Protein 3e-31 41
istB1 YP_005282953.1 insertion sequence IS21 putative ATP-binding protein IstB VFG1606 Protein 3e-31 41