Gene Information

Name : GPOL_c01370 (GPOL_c01370)
Accession : YP_005280576.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 153389 - 155086 bp
Length : 1698 bp
Strand : +
Note : -

DNA sequence :
ATGACGACCACACCGGTGCTCTCGGTGCGGGGGCTCTCGGTCGGCTACCGGAGCTCGCGTGAACTGCGAGAGGTGGTGCA
CGACATCAGCTTCGACGTCGCGCCCGGCCAGGTCCTCGCCCTCGTCGGGGAGTCGGGCTCGGGCAAGACCACGATGGGCC
ACGCCATCCTCGGTCTGCTGCCCGGCAACGGCGAGCTCACCGCGGGTTCGATCACCTTTCGCGGAGAGGAACTCACCACC
TTCACCGGCAAACAGTGGCGCGATCTGCGTGGGCGTACCGTCTCCCTGATCCCCCAGGACCCGACCGTCTCGCTGGATCC
GGTTCGGCGCGTGGGGCATCAGGTCGAGGACGTGCTGCGCCTGCACACCGACCTCGACGCCGCCGCACGACGTGAGCGGG
TACACGAACTGTTCGAGCTCGTCGGTTTCACCGAGGTGGCACGCCGCTACGAGCAGTACCCGCACGAACTGTCCGGCGGC
ATGCGCCAACGTGTGCTCATCGCGGCCGCGGTGGCCGGTGATCCGGACCTGATCATCGCCGACGAGCCGACCTCGGGGCT
CGACGTCACGGTCCAGAAGCAGGTGCTCGATCTCATCGACACGTTGCGGGAGCGGTCCTCGACGAGCATCGTGCTCATCA
CCCACGACCTCGGGGTGGCCGCCGACCGATCGGATGTCATCGGGGTGATGCAGCAGGGCCGCCTCGTCGAGTTCGGGCCC
ACCGCCGAGGTGATCGCCGACCCGCGCCACGACTACACGCGCCGGCTGCTCGCCAGCGTGCCGTCACGGTTGTCGCTGCG
CGCGGATCGTCGGCCCGTGCCGCCCGACGCCGACACCCTCATCGAGGTCCGTGACCTGCGCAAGGAGTTCGGCGACTTCC
CGGCGGTCAACGGCATCTCGTTCGCGGTCCGGGCCGGTGAAACGGTATCGATCGTGGGCGAATCCGGAAGCGGAAAGACC
ACCACGGCAAGGATTCTGACCGGTCTCACCGCCGCGTCCGACGGCAGTGTCTCGGTATTGGGTACCGAGATCACCGGGCT
ACGGCGCAGCGGATTCCGTCCGCTACGCCGTGACATCCAGATCGTCTATCAGAACCCGTATTCCTCTTTCGATCCGCGAT
TCGACGTCTTCGATGTGGTGGCCGAGCCGCTGCTGTCCTTCGCCGACGACAGCGTGCGCTGGGCGCGCCACAGCAGACGC
GGCCGACGCCGCGTGTTCGGTGACCGTGTCGCCGCCGCCCTCGAATCCGCGGCGCTCCCCGCCGATTTCATCGACCGGCA
TCCGCGTGAACTCTCCGGCGGACAACGCCAACGCGTTGCGATCGCGCGAGCACTCGTACTCGAGCCGAAGATTCTTGTTC
TCGACGAGCCGATCTCGGCTCTCGACGTGTCCGTCGCCGCGCAGATCCTCGCACTGCTCGAGCGTCTGCAGCGCGAACGT
GGGCTGACCTACGTGTTCATCTCGCACGACCTCGCGGCGGTCGCCGCACTGTCCGACCGGGTGGTGGTGATGCGCCACGG
CGAGATCGTCGAGCAGGGGCCTGTCGAGCAGGTGTTCGGCAACCCCACCGACGAGTACACCGTGCGACTGCTGAGTGCCA
TCGCCGGCGGCGACCTCCCCGGCGACGAGTTGTTCGACGGTGAAATACCCAGCTCAGCAGCGCAATTGACTGCCACGTCG
GGAAGGGCCCACTCATGA

Protein sequence :
MTTTPVLSVRGLSVGYRSSRELREVVHDISFDVAPGQVLALVGESGSGKTTMGHAILGLLPGNGELTAGSITFRGEELTT
FTGKQWRDLRGRTVSLIPQDPTVSLDPVRRVGHQVEDVLRLHTDLDAAARRERVHELFELVGFTEVARRYEQYPHELSGG
MRQRVLIAAAVAGDPDLIIADEPTSGLDVTVQKQVLDLIDTLRERSSTSIVLITHDLGVAADRSDVIGVMQQGRLVEFGP
TAEVIADPRHDYTRRLLASVPSRLSLRADRRPVPPDADTLIEVRDLRKEFGDFPAVNGISFAVRAGETVSIVGESGSGKT
TTARILTGLTAASDGSVSVLGTEITGLRRSGFRPLRRDIQIVYQNPYSSFDPRFDVFDVVAEPLLSFADDSVRWARHSRR
GRRRVFGDRVAAALESAALPADFIDRHPRELSGGQRQRVAIARALVLEPKILVLDEPISALDVSVAAQILALLERLQRER
GLTYVFISHDLAAVAALSDRVVVMRHGEIVEQGPVEQVFGNPTDEYTVRLLSAIAGGDLPGDELFDGEIPSSAAQLTATS
GRAHS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-104 42
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-77 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-77 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-77 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-77 41