Gene Information

Name : GPOL_c12440 (GPOL_c12440)
Accession : YP_005281668.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Resistance
Product : putative copper-translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1440416 - 1442530 bp
Length : 2115 bp
Strand : -
Note : -

DNA sequence :
ATGGTCGGCGGCATGGAGCAGCACGACCAGCATGGAAACACCACCGATCACCCGGACCACACGCACCCAGCACACGCCGG
TCATTCCGGTCACAGTGCGATGGGTGGTCACGCCGGGCACGGAGATCATGTCGCCGTGTTCCGCCGGCTCTTCTGGATCA
CGCTGGTGCTCGCGATCCCGACCGTGGTGTTCAGCGGCATGTTCGCCGACCTGATCGGCTACTCGCTCCCCGCCGCCGGC
TGGGTGCGCTGGGTATCGCCGGTGATCGGGACCGTGATCTATCTGTGGGGAGGTCGACCCTTCCTCGGCGGCGCGGTCGG
CGAGATCCGTTCTCGCGCTCCGGGGATGATGCTGTTGATCGCGCTCGCGATCACCGTCGCGTTTGTCGCATCCTGGGGAT
CGACCCTGCATCTGCTCGACCACGAGCTCGATTTCTGGTGGGAGCTGGCACTTCTCGTCGTCATCATGCTGCTCGGTCAC
TGGATCGAGATGCGTTCGCTGGCGCAGGCGACATCAGCACTCGACTCGCTCGCGGCATTGCTCCCGGACTCCGCCGAGAA
GGTGGTCGACGGGCAGACCGTGAGCGTCGCGCCGGCCGACCTCGTCGTCGGTGACGTGGTGCTCGTACGCCCAGGCGGGT
CAATACCCGCCGACGGTGTCGTCCTGGACGGGTCGGCGAACCTCGACGAATCGATGGTGACCGGCGAATCCACGCCGGTC
ACACGTGGCGTCGGGGATTCGGTGGTGGCAGGCACCGTCGCCACCGATTCCGGTCTGCGGATCGAGGTCTCGGCGATCGG
CGACGACACGGCCCTGGCAGGGATCGGACGACTCGTCGCCGAAGCACAGGCGTCATCCTCGCGGGCACAGCGTCTCGCCG
ACACCGCCGCCGGCTGGCTGTTCTGGTTCGCGCTGGGCTCAGCCGTTCTGACGGCGATCGCGTGGGTCGCGCTCGGCATG
CCCGACGATGCGGTCGTCCGCACCATCACCGTGCTCGTCATCGCCTGCCCGCACGCGCTGGGACTGGCCATCCCGTTGGT
CGTCGCGATCGCCACCGAACGGGCCGCGCGCGGCGGGGTGCTGATCAAGGACCGCTTGGCGCTCGAGTCCATGCGGACCG
TCGACGCGGTCTTGTTCGACAAGACGGGCACGCTGACCAAGGGCGAGCCCGCGGTCACCGCGGTCGAGCCGACGCCGGAC
CACTCCACCGACGACGTACTCACCGCTGCAGCGTCCGCAGAATCCGGCAGCGAACACCCCCTGGCCCGTGCGATCGTCCA
GGCCGCTCGCTCCGAGGAACTGAACATCGCACCCGCACAGGACTTCTCATCGTCTCCGGCCGTCGGCGTCACAGCGACGG
TAAACGGTCACGAAATCCATGTGGGCGGTCCGCGCATGCTCGACGAGATGAGACTCGACGAGCTCGCCGTCGCCGACGAC
TGGCGCGAGCAGGGCGCGATCATCCTGCACGTGGTCGCCGATGGCACGGTGATCGGCGCACTGCGACTCGCCGACGAGGT
CCGCCCCGAATCTCGGCAGGCCGTCGATGCACTACACCGCCTCGGCGTGCAGGTGGTGATGGTCACCGGAGATGCGCAGG
CCGTTGCCGACAGCGTCGCCGCCGAGCTCGACATCGACCGCGTCTACGCGGGTGTACGTCCAGAAGACAAGTCCGCCACG
GTTTCTGAGCTTCAGCGCGAGGGCCATCGGGTCGCCATGGTTGGCGACGGCGTCAACGACGCCCCCGCTCTCGCACAAGC
CGACGTCGGCATCGCGATCGGTGCGGGCACCGACGTCGCGGTCGCCTCCGCCGGCGTCATCCTCGCATCCTCCGATCCAC
GCTCGGTGTTGTCGGTGATCGAGTTGTCGCGTGCGGGCTATCGCAAGATGCAGCAGAACCTTTGGTGGGCAGCGGGATAC
AACCTGATCTCGGTACCGCTGGCGGCCGGCGTGCTCGCGCCCATAGGCTTCGTGCTGCCGATGAGCGTCGGCGCGATCCT
GATGTCGGCGTCCACCGTCGTCGTGGCGCTCAACGCCCAATTGCTGCGCCGGCTCGACATCTCACCCGAGGCGAGCACTC
GCCGAATCCTGCAGCAGCGCACTGAAAACGGATAA

Protein sequence :
MVGGMEQHDQHGNTTDHPDHTHPAHAGHSGHSAMGGHAGHGDHVAVFRRLFWITLVLAIPTVVFSGMFADLIGYSLPAAG
WVRWVSPVIGTVIYLWGGRPFLGGAVGEIRSRAPGMMLLIALAITVAFVASWGSTLHLLDHELDFWWELALLVVIMLLGH
WIEMRSLAQATSALDSLAALLPDSAEKVVDGQTVSVAPADLVVGDVVLVRPGGSIPADGVVLDGSANLDESMVTGESTPV
TRGVGDSVVAGTVATDSGLRIEVSAIGDDTALAGIGRLVAEAQASSSRAQRLADTAAGWLFWFALGSAVLTAIAWVALGM
PDDAVVRTITVLVIACPHALGLAIPLVVAIATERAARGGVLIKDRLALESMRTVDAVLFDKTGTLTKGEPAVTAVEPTPD
HSTDDVLTAAASAESGSEHPLARAIVQAARSEELNIAPAQDFSSSPAVGVTATVNGHEIHVGGPRMLDEMRLDELAVADD
WREQGAIILHVVADGTVIGALRLADEVRPESRQAVDALHRLGVQVVMVTGDAQAVADSVAAELDIDRVYAGVRPEDKSAT
VSELQREGHRVAMVGDGVNDAPALAQADVGIAIGAGTDVAVASAGVILASSDPRSVLSVIELSRAGYRKMQQNLWWAAGY
NLISVPLAAGVLAPIGFVLPMSVGAILMSASTVVVALNAQLLRRLDISPEASTRRILQQRTENG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 6e-88 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_c12440 YP_005281668.1 putative copper-translocating P-type ATPase BAC0629 Protein 1e-116 46
GPOL_c12440 YP_005281668.1 putative copper-translocating P-type ATPase BAC0101 Protein 4e-80 43
GPOL_c12440 YP_005281668.1 putative copper-translocating P-type ATPase BAC0079 Protein 1e-116 42
GPOL_c12440 YP_005281668.1 putative copper-translocating P-type ATPase BAC0383 Protein 3e-103 41