Gene Information

Name : GPOL_c10810 (GPOL_c10810)
Accession : YP_005281509.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1239517 - 1240215 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence : 
GTGGGGGAGCGCAACCTCGTCGAGGCAGTCGACGTCGTCCGTGAATACCAGTTGGGGCAGGAGCGGGTGCGTGCCCTCGA
CGGGGTGAACCTGACCCTGCCGGGCGGGCAGTTCGTGTCGATCGTCGGCCCCTCGGGAGCCGGCAAATCCACGCTGCTGC
ACGTGATGGGCGCACTCGACACCCCCACCTCGGGGTCCATCCGCGTCGACGGCGTCGATCTCGGTGCCCTCGACGACAAC
GCCGCCTCCGAGTTCCGGCGCCATCGCGTCGGCTTCATCTTCCAGTTCTTCAATCTCGTCCCGACGATGTCGGCGTGGGA
AAACGTTGCGCTGCCCCAACTTCTCGACTCCAAGTCGCTGCGCCGGGCCAAACCACGCGCCGTCGAGCTGTTGGAGCGGG
TCGGTCTCGGTGACCGCATCAACCACCGGCCATCGGAGCTTTCGGGCGGGCAGATGCAGCGCGTGGCGATCGCCCGCTCG
CTCATCATGGAACCGGCGATCCTGCTCGCCGACGAGCCGACCGGAAATCTCGACTCCACCACCGGACAGTCTGTGCTGCA
ACTGCTCTCCGACGTCGCCCACGGTTCCGGCGCTCATGACGAGCACGCCGGCCGGCTGGTCGTCATGGTGACCCACGACG
AGCACGCCGCGGCGGTCGCCGACACCACGATCACCGTCCGGGACGGAAAGATCGCGTGA

Protein sequence : 
MGERNLVEAVDVVREYQLGQERVRALDGVNLTLPGGQFVSIVGPSGAGKSTLLHVMGALDTPTSGSIRVDGVDLGALDDN
AASEFRRHRVGFIFQFFNLVPTMSAWENVALPQLLDSKSLRRAKPRAVELLERVGLGDRINHRPSELSGGQMQRVAIARS
LIMEPAILLADEPTGNLDSTTGQSVLQLLSDVAHGSGAHDEHAGRLVVMVTHDEHAAAVADTTITVRDGKIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_c10810 YP_005281509.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-38 47
GPOL_c10810 YP_005281509.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-40 45
GPOL_c10810 YP_005281509.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-42 44
GPOL_c10810 YP_005281509.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-44 42
GPOL_c10810 YP_005281509.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-37 41