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Name : gabD1 (GPOL_c10660) Accession : YP_005281494.1 Strain : Gordonia polyisoprenivorans VH2 Genome accession: NC_016906 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase GabD Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 1222784 - 1224253 bp Length : 1470 bp Strand : - Note : - DNA sequence : ATGAGCACCACCGAGATCATCGACACCCAGGCCGTTCTCGACGGCGTACCCACCGGTTTGTGGATCGGTGGCGAGTCGGT CGAGGCGTCGGATTCGGGTACGTTCACCGTCTACGATCCGGCAACGGAGCAACCGCTGACCCAGGTTGCCGACGCCACCG TCGAGGACGCGCGTCGCGCCCTGGACGTCGCAACCTCGGTCGCCGATGACTGGGCGGCGACCCCGGCCCGTGAGCGCGGT GAGATCCTGCGTCGCGCTTTCGGTCTCGTCGCCGACCGCACCGACGATCTCGCGATGCTGATGACCCTCGAACTCGGACG CGCCCTGCCCGACAGTCTGGCCGAGGCGCGCTACGGCAACGAGTTCCTGCGGTGGTTCGCCGAGGAGGCGGTACGCATCG ACGGCAGGTTCACCCAGTCTCCTGCGGGGACCGGCCGGATCGTCGTGACCCACGCCCCGGTCGGCCCGTGCCTGGCGATC ACACCGTGGAATTTCCCGCTGGCCATGGGAACGCGCAAGATCGGTCCCGCGCTGGCCGCGGGCAACGTGATGCTGGTCAA GCCGGCCCACGAGACGCCGTTGACGATGCTGGCGCTCGCCGAGATCTTCGCCGAGGCCGGACTTCCCGCTGGCGTGCTGT CGGTGCTCCCGACGATGCGGGCGCGGGAGGTGGCGTCGGCGATCATCGGCGACGACCGGATTCGCAAGATCAGCTTCACC GGCTCGACCCCGGTCGGCAAGAATCTACTCGGCCAGGCCGCCGAGCGGGTCCAGCGCACATCGATGGAACTCGGCGGCAA CGCGCCGTTCGTCGTGTTCGACGACGCCGACGTCGACAAGGCCGTCGAGGGTGCCTTCCTGGCCAAGATGCGCAACGGCG GCGAGGCGTGCACCGCGGCCAATCGCTTCCTGGTGCAGTCCGGTGTGGTCGAGGAGTTCACAGAGAAACTCGTCGAGAAG ATGTCTGCGGTTCGGATCGGACCCGGATACGACGACGGCGTGACCCTCGGCCCGCTGGTCAGCGCAGCGCAGCGCGACAA GGTCGCCGAAGCCGTGGAGACCGCTGTCGCACACGGCGGCCGGGTTCGCCTGGGCGGCAAGGCCCCCGGCGGAAAGGGCT TCTTCTACCCGGCCACCGTCGTCGACAACGTCGACGCGTACGCGCCGGTCACCCGCGGCGAGATCTTCGGCCCGGTGGCC GTGATCAGTTCCTTCGACTCCGAGGACGAGGCGATCAAGGCCGCCAACTCCACCGAATTCGGTTTGGCCGCATACTTCTT CACCCGCGACCTGGATCGGGCGCTGCGCGTGTCGACGGCGCTGGACTCCGGCATGGTGGGGGTGAATCGCGGAGTGATCT CCGATGTCGCCGCACCGTTCGGCGGCGTCAAGGAGTCCGGCATCGGTCGCGAGGGCGGTTCGGAGGGCATCGAGGAGTAC CTGACGGTCAAGTACGTCGCCTTCACCTGA Protein sequence : MSTTEIIDTQAVLDGVPTGLWIGGESVEASDSGTFTVYDPATEQPLTQVADATVEDARRALDVATSVADDWAATPARERG EILRRAFGLVADRTDDLAMLMTLELGRALPDSLAEARYGNEFLRWFAEEAVRIDGRFTQSPAGTGRIVVTHAPVGPCLAI TPWNFPLAMGTRKIGPALAAGNVMLVKPAHETPLTMLALAEIFAEAGLPAGVLSVLPTMRAREVASAIIGDDRIRKISFT GSTPVGKNLLGQAAERVQRTSMELGGNAPFVVFDDADVDKAVEGAFLAKMRNGGEACTAANRFLVQSGVVEEFTEKLVEK MSAVRIGPGYDDGVTLGPLVSAAQRDKVAEAVETAVAHGGRVRLGGKAPGGKGFFYPATVVDNVDAYAPVTRGEIFGPVA VISSFDSEDEAIKAANSTEFGLAAYFFTRDLDRALRVSTALDSGMVGVNRGVISDVAAPFGGVKESGIGREGGSEGIEEY LTVKYVAFT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 5e-94 | 51 |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-89 | 47 |
