Gene Information

Name : GPOL_c10300 (GPOL_c10300)
Accession : YP_005281458.1
Strain : Gordonia polyisoprenivorans VH2
Genome accession: NC_016906
Putative virulence/resistance : Virulence
Product : putative sensory transduction protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1187218 - 1187904 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
GTGACGCATGTACTGATCGTCGAGGACGAGGAGTCGTTGGCCGATCCGCTGGCCTTCCTCCTGCGCAAGGAGGGGTTCGA
GGCGAGCGTCGTCAACGATGGTGCACAGGCCATCTCGGTGTTCGAGCGCATCAGCCCCGACATCGTCCTGCTCGACCTCA
TGCTCCCCGGGGTGTCGGGGACCGAGATCTGCAAATCGCTGCGCGCCCGGTCGAGCGTGCCGGTGATCATGGTGACCGCC
CGCGACAGCGAGATCGACAAGGTCGTCGGACTCGAACTCGGTGCCGACGACTATGTCACCAAACCGTATTCGGCGCGTGA
GCTCATCGCACGCATCCGGGCGGTCCTGCGTCGTGGGGGAGACGTCGGCGACGACGACCTGGCCTTGGCGGTCCTGGAAT
CCGGACCGGTCCGGATGGACGTCGAACGCCACACCGTCGCGGTCAACGGCGAGTCGATCACGTTGCCGCTCAAGGAGTTC
GATCTCCTCGAATACCTACTCCGCAACTCCGGACGGGTACTCACCCGCGGGCAGTTGATCGACCGCGTGTGGGGTGCGGA
CTACGTCGGGGACACCAAGACCCTCGATGTCCACGTCAAGCGGCTGCGCTCGAAGATCGAACCCGATCCGGCCTCGCCGA
AACACCTTGTGACGGTGCGTGGATTGGGCTACAAGTTCGAGCCGTGA

Protein sequence : 
MTHVLIVEDEESLADPLAFLLRKEGFEASVVNDGAQAISVFERISPDIVLLDLMLPGVSGTEICKSLRARSSVPVIMVTA
RDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDVGDDDLALAVLESGPVRMDVERHTVAVNGESITLPLKEF
DLLEYLLRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEPDPASPKHLVTVRGLGYKFEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-33 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_c10300 YP_005281458.1 putative sensory transduction protein AE000516.2.gene3505. Protein 1e-43 48
GPOL_c10300 YP_005281458.1 putative sensory transduction protein NC_012469.1.7685629. Protein 2e-43 45
GPOL_c10300 YP_005281458.1 putative sensory transduction protein NC_012469.1.7686381. Protein 1e-44 44
GPOL_c10300 YP_005281458.1 putative sensory transduction protein HE999704.1.gene2815. Protein 5e-41 43
GPOL_c10300 YP_005281458.1 putative sensory transduction protein NC_002952.2859905.p0 Protein 2e-42 43
GPOL_c10300 YP_005281458.1 putative sensory transduction protein NC_009782.5559369.p0 Protein 2e-42 43
GPOL_c10300 YP_005281458.1 putative sensory transduction protein NC_002951.3237708.p0 Protein 2e-42 43
GPOL_c10300 YP_005281458.1 putative sensory transduction protein NC_003923.1003749.p0 Protein 2e-42 43
GPOL_c10300 YP_005281458.1 putative sensory transduction protein NC_007622.3794472.p0 Protein 2e-42 43
GPOL_c10300 YP_005281458.1 putative sensory transduction protein NC_002758.1121668.p0 Protein 2e-42 43
GPOL_c10300 YP_005281458.1 putative sensory transduction protein NC_009641.5332272.p0 Protein 2e-42 43
GPOL_c10300 YP_005281458.1 putative sensory transduction protein NC_013450.8614421.p0 Protein 2e-42 43
GPOL_c10300 YP_005281458.1 putative sensory transduction protein NC_007793.3914279.p0 Protein 2e-42 43
GPOL_c10300 YP_005281458.1 putative sensory transduction protein NC_002745.1124361.p0 Protein 2e-42 43
GPOL_c10300 YP_005281458.1 putative sensory transduction protein AE016830.1.gene1681. Protein 3e-44 42
GPOL_c10300 YP_005281458.1 putative sensory transduction protein BAC0197 Protein 4e-27 42
GPOL_c10300 YP_005281458.1 putative sensory transduction protein BAC0308 Protein 2e-27 41
GPOL_c10300 YP_005281458.1 putative sensory transduction protein BAC0125 Protein 2e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GPOL_c10300 YP_005281458.1 putative sensory transduction protein VFG1563 Protein 2e-33 41
GPOL_c10300 YP_005281458.1 putative sensory transduction protein VFG1702 Protein 5e-33 41