|
Name : EKO11_4736 (EKO11_4736) Accession : YP_005280353.1 Strain : Genome accession: NC_016904 Putative virulence/resistance : Virulence Product : type IVB pilus formation outer membrane protein, R64 PilN family Function : - COG functional category : - COG ID : - EC number : - Position : 76241 - 77923 bp Length : 1683 bp Strand : - Note : KEGG: seh:SeHA_A0117 type IVB pilus formation outer membrane protein, R64 PilN family; TIGRFAM: type IVB pilus formation outer membrane protein, R64 PilN family; PFAM: Secretin domain protein; type II and III secretion system protein DNA sequence : ATGAAAAAATCACACCAGCGTTCAATGAAGCTGGCGGTGCTCCCCTGCATGATCGCCGTCGCTCTTTCCATCTCCGGATG TACTTTCAGCGAAATCAACAAAATGCAGAAAAAAGCACAGGAAGACTCAGCACATGCACGGGAAAAGGTATCAGCCCTTT CGGCCCGTAAATCGCAGGCTCTTACCTGGCTCGATAATCAATGGATAAACCCTGTTCCGGTCGCTCAGGTATCAAGAGAG AAAAAACAAACAGCTCCAGCCTGCTACATCACGCAGGCAAGAAAAGGAGAGATCACTCTGCAGGAACTGGGGCAACGTAT TACTGCCGTATGCGGCATCCCTGTGATCATCACGCCTGACGCAGCCAATTCAACTCTTGAAGGAGGCGCTACCCGCCAGA TGACAGGAACACTACCAGCACCAGATGAAAATGGACGTCTACCGTTAAGCAGCCTGGGCAGCACAACAATGACTACCTCC ACTCAGCCATTAACGCTGAATAACCTCATGTGGCAGGGAGATATCAATGGTCTTCTGGATCTGATGGCCAGCCGGAGTGG TCTGTACTGGCGCATGGATAATGGTCGGATTGTATTCTATCTGACTGAAACCAGAACGTATCCACTTCATATGCTGAACA CCAAAACCAGCAGCAGTTCCAGTGTCAGCTCTGGCTCAACAAGCACAATGGGGGCAACAGGAGGCCAGGATAACTCAGCA TCCGGTGATGCAACGTCCTCTCAGAGCACAACCGTTGGTCAGGAATACGATCTGTATGAAGATATCCGGAAAACTATTGA AGCAATGCTGACACCAGAAAAAGGCCGTTACTGGTTATCTGCATCGAGCTCAACGCTGACAGTCACTGATACTCCAGCTG TCCAGGAAGCCGTCGCACGATATGTAGACGAACAAAACAGTATTATGAACCGCCAGGTAGCCCTGAACGTACAGGTTCTG AGCGTCAGCAATACCAGAAACGAACAGTTCGGTCTGGACTGGAACCTTGTTTATAAATCGCTACATTCCGCCGGAGCAAC GTTGAACAATGCAAGCGGAGATTTTACAGGCGCTACATCTGCAGGCGTATCAATTCTGGATACGGCAACAGGGAATGCCG CCAAATTCAGCGGTTCCAGCCTTCTGATTAAAGCACTGAGTGAACAAGGCGATGTCAGCGTTGTAACTTCACAAGAAAGC ACTGTCACAAACCTGACGCCGGTACCTATCCAGATGGCAGATCAGACAGTTTACGTCGCCCAGTCAGCAACAACTACGAC TACGGATGTAGGAGCAACAACAACATTAACACCGGGCATGATCACCACTGGATTCAATATGACCCTGCTGCCTTTAATTC AGAAAACAGGCAATCTCCAGTTGCAGATGAACTTTAATCTGTCTGATCCCCCAACTATCCGTAGCTTTACGTCAAAAGAC GGAAACAGTTACATCGAAATGCCATATACCAAACTGCGTTCACTGAGCCAGAAGGTCAATCTGAAAGAAGGGCAATCACT TGTCGTTACTGGTTTCGATCAGAACAATACGACGACAAGTAAAGCCGGTACATTTACGCCAGCAAATCCATTATTTGGTG GTTCACAAACAGGGAAAAATGAACGCAGCACACTTGTGATCATCATTACCCCGACTTTCCCGTCAGGAGGCAATAATGGC TGA Protein sequence : MKKSHQRSMKLAVLPCMIAVALSISGCTFSEINKMQKKAQEDSAHAREKVSALSARKSQALTWLDNQWINPVPVAQVSRE KKQTAPACYITQARKGEITLQELGQRITAVCGIPVIITPDAANSTLEGGATRQMTGTLPAPDENGRLPLSSLGSTTMTTS TQPLTLNNLMWQGDINGLLDLMASRSGLYWRMDNGRIVFYLTETRTYPLHMLNTKTSSSSSVSSGSTSTMGATGGQDNSA SGDATSSQSTTVGQEYDLYEDIRKTIEAMLTPEKGRYWLSASSSTLTVTDTPAVQEAVARYVDEQNSIMNRQVALNVQVL SVSNTRNEQFGLDWNLVYKSLHSAGATLNNASGDFTGATSAGVSILDTATGNAAKFSGSSLLIKALSEQGDVSVVTSQES TVTNLTPVPIQMADQTVYVAQSATTTTTDVGATTTLTPGMITTGFNMTLLPLIQKTGNLQLQMNFNLSDPPTIRSFTSKD GNSYIEMPYTKLRSLSQKVNLKEGQSLVVTGFDQNNTTTSKAGTFTPANPLFGGSQTGKNERSTLVIIITPTFPSGGNNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YpsIP31758_3734 | YP_001402688.1 | type IVB pilus formation outer membrane protein | Virulence | YAPI | Protein | 2e-93 | 49 |
| pilN | CAF28487.1 | putative lipoprotein | Virulence | YAPI | Protein | 4e-93 | 49 |
| YE3504 | YP_001007666.1 | putative type IV pilus operon lipoprotein | Virulence | YAPI | Protein | 9e-105 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EKO11_4736 | YP_005280353.1 | type IVB pilus formation outer membrane protein, R64 PilN family | VFG2310 | Protein | 4e-105 | 49 |
