Gene Information

Name : EKO11_4732 (EKO11_4732)
Accession : YP_005280349.1
Strain :
Genome accession: NC_016904
Putative virulence/resistance : Virulence
Product : type II secretion system F domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 71852 - 72937 bp
Length : 1086 bp
Strand : -
Note : PFAM: Type II secretion system F domain; KEGG: seh:SeHA_A0113 integral membrane protein

DNA sequence : 
ATGCGTGAAATGAATTTCAGTCAACGGCTGAGACGTTTCATTGTCAGAAAAACGTTCAGCGCCCCCTACAGGGTGCAGTT
TTACGAAGCTCTGCGTTTTCTGCTGGAAAATAAACAGCCATTAAAGACCGCACTGGAACAGATGCGGGATGCCTGGACAG
ACTTTGGACGAAAATGGCATCCCTTTGCTGAACTGGCCACAGACTGTATTGAGTCTCTTCGTGAAAACAGTGGCGAAAAC
TCTCTGGAATATACTCTTGGTTTATGGGTTCCCCAGGAAGAGGCTGCAGTAATCAGTGCCGGAATAAGAAGTGGTTCCAT
TGTGGATGCATTACAATTTGCCACCACACTTACAGATGCCAAAAAGCAACTCCATCAGGCCATATGGCAAATGGCTATTT
ACCCGGTGGGGTTGTTAATCATGATGACGGGGACATTATATGTTCTTAATACAGAGCTAATACCTGTACTGAGCAAAATA
AGCTCCCCTGATTCATGGAGTGGTGCTCTTGGTTTTCTCTATGGATTATCTGTGTTTGTCGATAATTACGGCGCTATATG
TGCCGTTCTTTTTGCAGTGGTCACAGGTGTAATATCATGGTCTCTGAAAAACTGGAAAAGCCGCTCTTTGGCTGACAATA
TAATGCCATGGAGTATTTATAAGGATATACAGGGGGCAGCATTCCTCCTGAATATGGCTGCACTTCTGAAAGCCAAAATG
ACAACGCTCAACTCACTGAACGTTCTTCAGGACTTTGCATCACCATGGTTAAGCACACGCCTTGACAGCATTATTTACCG
CGTACGCCAGGGGGATCACCTTGGGCTGGCTTTGCGTCAGTGCGGTTATCAGTTCCCATCCAGGGAAGCAGCCAACTTCC
TGTCTTTATTACAGGGAGATGGCGCAACGGAGCTAATCGGCAATTATGGCCAACGGTGGCTTGTACAAACGCTGGAGCGA
GTAAAAAAACGAGCAGCTGTTGTGCGTTTAATTATGCTGATATTTCTTGTCATGTCACTCCTGTTACTGGTCATGGCCGT
TGTAGACATTCAGTCTATTGGCGACAACAGTATGGGTAATCTTTAA

Protein sequence : 
MREMNFSQRLRRFIVRKTFSAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWHPFAELATDCIESLRENSGEN
SLEYTLGLWVPQEEAAVISAGIRSGSIVDALQFATTLTDAKKQLHQAIWQMAIYPVGLLIMMTGTLYVLNTELIPVLSKI
SSPDSWSGALGFLYGLSVFVDNYGAICAVLFAVVTGVISWSLKNWKSRSLADNIMPWSIYKDIQGAAFLLNMAALLKAKM
TTLNSLNVLQDFASPWLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSLLQGDGATELIGNYGQRWLVQTLER
VKKRAAVVRLIMLIFLVMSLLLLVMAVVDIQSIGDNSMGNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3501 YP_001007662.1 type IV pilus integral membrane protein Virulence YAPI Protein 3e-77 53
pilR YP_001402684.1 type IV pilus biogenesis protein PilR Virulence YAPI Protein 4e-69 51
pilR CAF28491.1 putative integral inner membrane protein Virulence YAPI Protein 4e-69 50
pilR AAC98886.2 PilR Virulence SPI-7 Protein 2e-61 47
pilR NP_458634.1 putative membrane protein Virulence SPI-7 Protein 2e-61 47
pilR NP_807845.1 hypothetical protein Virulence SPI-7 Protein 2e-61 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EKO11_4732 YP_005280349.1 type II secretion system F domain-containing protein VFG2314 Protein 1e-77 53