|
Name : EKO11_0948 (EKO11_0948) Accession : YP_005276649.1 Strain : Escherichia coli KO11FL Genome accession: NC_016902 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : - COG ID : - EC number : - Position : 995519 - 998164 bp Length : 2646 bp Strand : - Note : TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: eoh:ECO103_3363 putative ATP-dependent Clp proteinase ATP-binding chain; SMART: AAA ATPase DNA sequence : ATGACCGGAAATCACCCCGCCGCGCTGCTGCGTCGCCTTAACCCGTACTGTGCACGGGCGCTGGACGCTGCCGCCTCACT GTGTCAGACCCGCGCCCATGCGGAGATAACCATTGAACACTGGCTGCTGAAACTGCTGGAGCAGGGAGAAGGCGATATCA CGGTGATTGCCCGCCGCTATGAATGGGATATCGACACGCTCTGGCAGTCTCTGCTGGCACATCTGGACACCTTACCCCGC TCGGTCCGCGAACGTCCGCAGCTTTCTGAACCCCTGACGGCGCTTATCAGGCAGGCGTGGCTGATTGCCTCGCTGGAAGG CGACGACCCGCAAATCCGCAGTCAGCACCTGCTGATGGCGCTGACAGAAAAACCGATGCTGCCCGCCTGTAATGACCTGT GGGTATTGCTGAGCCTGAGCCGTGTGCAGCTTGAGCGGCTGCGTCCCCTGCTGGATGCGCAGTCGGATGAATGTCCGGCA CGTCAGCCACAGGTCACCGAACCGCTGACATCCGCGCAACCAGAGGCGGCAACGACGGACGCACCGGCAAAAACGCTGAC GGGGAAACAGGATGACGCCCTGCTGGCGGTGCTTAACCGCTTTACCGAAGACGTGACGGAAAAAGCCCGCAGCGGGCGAA TCGACCCGGTATTCGGGCGCGACACGGAAATTCGCCAGATGGTCGATATCCTCTCACGTCGCCGCAAAAACAACCCGATT CTGGTGGGAGAACCGGGGGTGGGCAAAACCGCGCTGGTGGAAGGGCTGGCGCTGCGTATCGCCGAAGGCAACGTGCCGGA CAGCCTGAAAACGGTGCATATCCGCACACTGGACCTCGGTCTGTTACAGGCTGGCGCGGGTGTTAAAGGTGAATTTGAAC AGCGGCTGAAAAATGTCATCGATGCAGTGCAGAAATCACCGGAGCCGGTACTGCTGTTTATTGATGAAGCCCATACCATT ATCGGTGCGGGTAATCAGGCAGGCGGCGCGGATGCGGCGAACCTGCTGAAACCGGCGCTGGCAAGGGGCGAACTGCGCAC CATCGCCGCCACAACGTGGAGCGAATACAAACAGTATTTTGAGCGCGACGCCGCGCTGGAACGCCGCTTCCAGATGGTGA AAGTCGACGAGCCGGATGATGACACCGCCTGCCTGATGCTGCGGGGACTCAAGGCCCGCTATGCACAGCACCACGGCGTA CATATGCTGGACAGCGCCATTCAGACCGCCGTGCGCCTGTCGCGCCGCTATCTGACCGGACGCCAGTTGCCGGACAAGGC GGTTGATTTGCTGGATACCGCCGGGGCAAGAGTCCGCATGAGCCTCGACACCCTGCCGGAACCGTTGACGCAGCTTCAGG CGCGTCTGACCGCGCTGGATATTGAGCGGGAAGCAATTGAGCAGGACAGCGTGTTTTATCCCGAAGCCAGCCCGGAGCGG CTGGCGGAACTGACCGATTTGCGTGATGAGCTGCAGGCAGAAGCCGGGCATCTGGAAGCGCAGTATCAGCAGGAAAAGGC ACTGGCGCAGCAGATTATGACGTTGCGTCAGGAAGGGACAGACAGCACTGAACTGCAACAGCAACTGCGAGCGCATCAGG GCTTTGCTCCGTTGCTGGCGCTGGATGTGGACGCCCGCGCCGTCGCCACGGTGGTGGCGGACTGGACCGGCATCCCGCTC TCTTCGCTGCTCAAGGACGAGCAGAGCGACCTGCTCAGTATGGAACAAAGCCTTGAAAACCGCGTTGTCGGGCAAAGCCC GGCGCTCTGCGCCATCGCACAGCGGCTGCGGGCGGCTAAAACCGGCCTCACGCCGGAGAATGGCCCGCAGGGGGTATTCC TGCTGACCGGCCCCAGCGGCACCGTTAAAACCGAAACTGCGCTCACACTGGCCGACACCCTGTTTGGCGGTGAAAAATCC CTTATCACCATCAACCTCTCCGAATATCAGGAGCCGCATACCGTCTCCCAGCTTAAGGGGTCTCCTCCGGGCTACGTTGG CTACGGTCAGGGCGGCGTACTTACCGAAGCCGTTCGCAAACGCCCGTACAGCGTGGTGCTGCTCGACGAAGTGGAAAAGG CGCACCGCGACGTAATGAACCTGTTCTATCAGGTGTTTGACCGGGGTTTTATGCGCGACGGCGAAGGGCGGGAAATTGAC TTCCGCAACACCGTGATTCTGATGACGGCTAATCTGGGCAGCGACCACATCATGCAGCTGCTGGAGGAAAAACCGGACGC CACAGACGCAGACCTGCATGAACTGCTGTATCCCCTGCTGCGCGAGCACTTCCAGCCTGCACTGATGGCGCGTTTTCAGA CGGTGATTTACCGCCCGCTGGGACAGGAAGCGATGCGCGCCATTGTGGAAATGAAACTGGCGCAGGTGGTTCGTCGTCTT CGTCAGCACTATGGGCTGGAAACGGAAATCAACGACAGCCTGTACGACGCCCTGACCGCCGCCTGCCTGCTGCCGGACAC CGGTGCGCGTAATATCGACAGCCTGCTGAACCAGCAAATCCTGCCGGTCTTAAGCCAGCAGTTGCTGGCACAGCAGGCTG CGCACCATAAGCCAGCCCAACTACGGCTTGGCTGGGATGAGGAAGACGGGATTGTACTGGAGTTCGCTACGGAAGAGATG CAATAA Protein sequence : MTGNHPAALLRRLNPYCARALDAAASLCQTRAHAEITIEHWLLKLLEQGEGDITVIARRYEWDIDTLWQSLLAHLDTLPR SVRERPQLSEPLTALIRQAWLIASLEGDDPQIRSQHLLMALTEKPMLPACNDLWVLLSLSRVQLERLRPLLDAQSDECPA RQPQVTEPLTSAQPEAATTDAPAKTLTGKQDDALLAVLNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPI LVGEPGVGKTALVEGLALRIAEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQKSPEPVLLFIDEAHTI IGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKARYAQHHGV HMLDSAIQTAVRLSRRYLTGRQLPDKAVDLLDTAGARVRMSLDTLPEPLTQLQARLTALDIEREAIEQDSVFYPEASPER LAELTDLRDELQAEAGHLEAQYQQEKALAQQIMTLRQEGTDSTELQQQLRAHQGFAPLLALDVDARAVATVVADWTGIPL SSLLKDEQSDLLSMEQSLENRVVGQSPALCAIAQRLRAAKTGLTPENGPQGVFLLTGPSGTVKTETALTLADTLFGGEKS LITINLSEYQEPHTVSQLKGSPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREID FRNTVILMTANLGSDHIMQLLEEKPDATDADLHELLYPLLREHFQPALMARFQTVIYRPLGQEAMRAIVEMKLAQVVRRL RQHYGLETEINDSLYDALTAACLLPDTGARNIDSLLNQQILPVLSQQLLAQQAAHHKPAQLRLGWDEEDGIVLEFATEEM Q |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-141 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EKO11_0948 | YP_005276649.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 7e-131 | 44 |
| EKO11_0948 | YP_005276649.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 1e-148 | 44 |
| EKO11_0948 | YP_005276649.1 | type VI secretion ATPase, ClpV1 family | VFG0079 | Protein | 1e-99 | 41 |
