Gene Information

Name : EKO11_0884 (EKO11_0884)
Accession : YP_005276589.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Virulence
Product : lytic transglycosylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 921561 - 922037 bp
Length : 477 bp
Strand : -
Note : KEGG: etw:ECSP_3808 predicted lytic transglycosylase; manually curated; PFAM: Lytic transglycosylase catalytic

DNA sequence :
ATGCGCTCACCAAAAGTTAAATTCTTAACCATCTTCACGTTTTGTATATTTATTACAAAAATGTCTTTCGCCAGCAACTC
TTGCTCTAATGAAGCAGGAACAATGTTCAGAATCGAACCAAATTTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAA
AAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAG
ATGCATATTCCCCTGTTAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAA
AATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTT
TTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAACTAG

Protein sequence :
MRSPKVKFLTIFTFCIFITKMSFASNSCSNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKNNNIKSLDYWLMQINQ
MHIPLLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPKYILYIPGLMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3711 NP_311738.1 hypothetical protein Not tested LIM Protein 2e-46 92
pilT AAC98888.1 PilT Virulence SPI-7 Protein 3e-25 50
pilT NP_458636.1 putative membrane protein Virulence SPI-7 Protein 5e-25 50
pilT NP_807847.1 hypothetical protein Virulence SPI-7 Protein 5e-25 50