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Name : EKO11_0869 (EKO11_0869) Accession : YP_005276581.1 Strain : Escherichia coli KO11FL Genome accession: NC_016902 Putative virulence/resistance : Virulence Product : Yop virulence translocation R Function : - COG functional category : - COG ID : - EC number : - Position : 912956 - 913621 bp Length : 666 bp Strand : + Note : KEGG: eoh:ECO103_3430 surface presentation of antigens protein SpaP; TIGRFAM: Yop virulence translocation R; PFAM: type III secretion system inner membrane P protein DNA sequence : ATGTCAAATAGCATTTCGCTGATAGCGATATTATCATTATTTACACTATTGCCGTTTATAATAGCATCCGGGACATGTTT TATTAAATTCTCGATTGTTTTTGTTATTGTCCGAAACGCGCTGGGACTTCAGCAAGTGCCATCAAATATGACACTTAATG GGGTTGCTTTGCTATTGTCAATGTTCGTAATGATGCCGGTTGGGAAGGAAATATATAATAACAGTCAGAATGAGAATCTT TCATTCAATAATGTAGCATCGGTTGTTAATTTTGTTGAGACAGGCATGAGTGGTTATAAATCATATTTGATAAAATATTC TGAACCTGAGTTGGTTAGCTTTTTTGAAAAGATTCAGAAGGTGAATAGTTCTGAAGACAATGAAGAGATAATCGATGATG ATAATATTTCAATTTTCTCGTTACTGCCCGCATATGCATTGAGTGAGATAAAAAGTGCATTTATTATAGGTTTTTATATC TATTTACCCTTTGTCGTAGTGGATCTGGTTATATCCAGCGTTCTGTTAACGTTAGGTATGATGATGATGAGTCCGGTAAC CATATCTACACCGATAAAATTAATTTTGTTTGTCGCGATGGACGGTTGGACAATGTTATCAAAAGGGCTCATTTTACAAT ATTTTGACCTATCCATTAATCCCTGA Protein sequence : MSNSISLIAILSLFTLLPFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYNNSQNENL SFNNVASVVNFVETGMSGYKSYLIKYSEPELVSFFEKIQKVNSSEDNEEIIDDDNISIFSLLPAYALSEIKSAFIIGFYI YLPFVVVDLVISSVLLTLGMMMMSPVTISTPIKLILFVAMDGWTMLSKGLILQYFDLSINP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epaP | AAZ31293.1 | EpaP | Virulence | ETT2 | Protein | 1e-61 | 99 |
| spaP | NP_311752.1 | surface presentation of antigens protein SpaP | Not tested | LIM | Protein | 1e-63 | 99 |
| spaP | YP_217809.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 4e-48 | 67 |
| spaP | NP_461811.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 4e-48 | 67 |
| spaP | NP_457284.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-47 | 67 |
| spaP | NP_806493.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 1e-47 | 67 |
| spaP | AAS66865.1 | SpaP | Not tested | SSR-2 | Protein | 4e-47 | 59 |
| ysaR | AAS66846.1 | YsaR | Not tested | SSR-1 | Protein | 1e-40 | 58 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 2e-24 | 43 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 3e-25 | 43 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 3e-25 | 43 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-25 | 43 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 3e-25 | 43 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-25 | 43 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 3e-25 | 43 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 3e-25 | 42 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 3e-25 | 42 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-25 | 42 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-25 | 42 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-25 | 42 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 1e-24 | 42 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 4e-22 | 41 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 4e-22 | 41 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 9e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EKO11_0869 | YP_005276581.1 | Yop virulence translocation R | VFG0551 | Protein | 2e-48 | 67 |
| EKO11_0869 | YP_005276581.1 | Yop virulence translocation R | VFG2455 | Protein | 1e-46 | 62 |
| EKO11_0869 | YP_005276581.1 | Yop virulence translocation R | VFG1773 | Protein | 2e-47 | 62 |
| EKO11_0869 | YP_005276581.1 | Yop virulence translocation R | VFG1012 | Protein | 8e-43 | 59 |
| EKO11_0869 | YP_005276581.1 | Yop virulence translocation R | VFG0394 | Protein | 8e-26 | 46 |
| EKO11_0869 | YP_005276581.1 | Yop virulence translocation R | VFG0188 | Protein | 5e-26 | 45 |
| EKO11_0869 | YP_005276581.1 | Yop virulence translocation R | VFG0827 | Protein | 2e-25 | 42 |
| EKO11_0869 | YP_005276581.1 | Yop virulence translocation R | VFG0715 | Protein | 7e-25 | 42 |
