|
Name : EKO11_0760 (EKO11_0760) Accession : YP_005276474.1 Strain : Escherichia coli KO11FL Genome accession: NC_016902 Putative virulence/resistance : Virulence Product : general secretion pathway protein L Function : - COG functional category : - COG ID : - EC number : - Position : 792618 - 793796 bp Length : 1179 bp Strand : + Note : KEGG: sbc:SbBS512_E3404 GspL-like protein; TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L DNA sequence : GTGAGTTCCATCCTTGAGATTTTTTTCCCGCTTTGCGCCGCTGATCCCATCCATTGGCAGCGCCGTACACCCGATGTGGA GCACGGTATCTGGTCTGACGTTGCTAACGAACAGCTCCAGCAATGGCTGCAAACCGATGCGATTCGACTCTACATTCCCG GCGAATGGATCAGCGTCTGGCAGGTTGAACTGCCTGTTGTCGCCCGCAAGCAGATACCGACTATTCTGCCCGCCTTGCTG GAAGAAGAGCTGAACCAGGATATCGATGAACTGCATTTCGCCCCGTTGAAAATCGACCAGCAACTGGCAACCGTAGCAGT GATTCACCAACAGCATATGCGCAACATTGCGCAGTGGTTGCAGGAAAACGGCATCACCCGCGCTACCGTCGCGCCGGACT GGATGTCCATTCCTTGTGGGTTTATGGCTGGCGATGCGCAACGGGTTATCTGCCGCATCGATGAATGCCGGGGATGGAGC GCCGGGCTGGCGCTGGCTCCGGTCATGTTCCGCGCCCAGCTCAATGAGCAGGATTTACCGCTTTCGCTAACCGTAGTCGG CATTGCACCGGAAAAGCTATCAGCATGGGCTGGCGCAGACGCTGAACGCCTGACCGTTACAGCTCTGCCCGCCGTTACCA CTTATGGCAAACCGGAAGGGAACCTGCTGACAGGGCCGTGGCAGCCTCGCGTCAGCTACCGAAAACAGTGGGCGCGCTGG CGGGTGATGATTCTGCCGATATTGCTGATTCTGGTTGCGCTGGCAGTGGAGCGGGGCGTGACGTTATGGAGCGTCAGCGA ACAGGTGGCGCAAAGCCGCACCCAGGCGGAGGAACAGTTCTTAACGTTGTTCCCGGAGCAGAAGCGGATTGTGAATTTAC GCTCTCAGGTGACGATGGCGCTGAAAAAATATCGCCCACAGGCCGACGATACCCGGCTGCTCGCCGAGTTGTCAGCGATA GCCAGCACCCTGAAATCAGCGTCACTTTCCGACATCGAAATGCGTGGTTTCACCTTTGATCAAAAACGCCAGACGCTTCA CCTCCAGTTGCGGGCAGCAAACTTTGCCAGTTTCGACAAACTGCGTAGTGCACTGGCAACCGATTATGTTGTGCAACAGG ACGCGTTACAGAAAGAGGGTGATGCGGTTTCCGGCGGCGTAACGTTGCGGAGGAAATAA Protein sequence : MSSILEIFFPLCAADPIHWQRRTPDVEHGIWSDVANEQLQQWLQTDAIRLYIPGEWISVWQVELPVVARKQIPTILPALL EEELNQDIDELHFAPLKIDQQLATVAVIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGFMAGDAQRVICRIDECRGWS AGLALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAVTTYGKPEGNLLTGPWQPRVSYRKQWARW RVMILPILLILVALAVERGVTLWSVSEQVAQSRTQAEEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAI ASTLKSASLSDIEMRGFTFDQKRQTLHLQLRAANFASFDKLRSALATDYVVQQDALQKEGDAVSGGVTLRRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspL | YP_854399.2 | GspL-like protein | Not tested | PAI I APEC-O1 | Protein | 2e-118 | 96 |
| gspL | CAE85226.1 | GspL, hypotehtical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-164 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EKO11_0760 | YP_005276474.1 | general secretion pathway protein L | VFG2055 | Protein | 5e-118 | 97 |
