Gene Information

Name : EKO11_0748 (EKO11_0748)
Accession : YP_005276462.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Virulence
Product : putative lipoprotein AcfD precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 777860 - 782422 bp
Length : 4563 bp
Strand : +
Note : KEGG: eoi:ECO111_3795 putative lipoprotein AcfD homolog precursor

DNA sequence :
ATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTGAGTGCAACCCTGTTAGCCGGTTGTGATGGCGG
TGGCTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAACAGGGTCTTTGCCGGAAGTGAAACCTGATCCAACAC
CAAACCCGGAGCCGACGCCTGAGCCAACGCCGGACCCAGAACCTACGCCGGAACCGACACCTGATCCTGAGCCAACACCA
GAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACTCTGGGCGGAAGCCTGCGGGTAACTGGTGATATCAC
CTGTAATGATGAATCCAGCGATGGCTTTACCTTTACACCAGGCGACAAAGTCACCTGTGTGGCAGGGAACAACACGACAA
TTGCTACCTTCGACACCCAGTCAGAAGCTGCGCGTAGCCTGCGTGCGGTTGAAAAAGTGTCGTTTAGTCTTGAGGACGCG
CAAGAACTGGCGGGTTCCGACAACAAGAAAAGCAATGCGCTCTCGCTGGTCACCTCCATGAACAGTTGCCCGGCGAATAC
AGAACAGGTGTGCCTGGAGTTCTCCTCGGTGATCGAGAGTAAACGTTTCGACTCGCTGTATAAGCAAATCGATCTGGCAC
CGGAAGAATTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCCGCGACCGATAAAGCGCCATCCACTCATACTTCA
CCGGTCGTGCCCGCCACCACTCCGGGAACAAAACCGGATCTAAACGCTTCCTTCGTGTCGGCTAACGCGGAACAGTTTTA
TCAGTATCAACCCACTGAAATCATTCTCTCTGAAGGTCGACTGGTCGATAGTCAGGGGGATGGTGTTGTTGGTGTCAACT
ATTACACCAATTCCGGCCGTGGTGTAACCGGAGAAAACGGGGAATTTTCCTTTAGTTGGGGGGAAACCATCTCCTTTGGC
ATCGACACTTTTGAGCTTGGTTCTGTGCGTGGTAACAAGTCGACTATTGCATTGACTGAACTGGGTGATGAAGTTCGCGG
GGCAAATATCGATCAGTTGATTCACCGCTATTCGAAGGCTGGACAAAATCACACGCGTGTAGTTCCGGATGAAGTGCGCA
AGGTTTTTGCTGAATATCCCAACGTGATTAACGAGATTATCAATCTCTCGTTATCCAATGGTGCGACGCTGGGGGAAGGT
GAGCAAGTCGTTAATCTGCCTAACGAATTTATCGAGCAGTTTAAGACGGGTCAGGCCAAAGAGATCGATACCGCGATTTG
TGCGAAAACCGATGGTTGTAACGAGGCTCGCTGGTTCTCGCTGACAACGCGCAATGTTAATGACGGCCAGATTCAGGGCG
TTATCAACAAGCTGTGGGGCGTGGATACGAACTACAAATCTGTCAGTAAGTTCCATGTATTCCATGACTCTACCAACTTC
TATGGCAGCACGGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAACGCGGCCTTCCCGATTCTGATGGCGCGTAA
TGATAAAAACTACTGGCTGGCGTTTGGCGAAAAACGCGCCTGGGATAAAAATGAGCTGGCGTACATTACTGAAGCGCCTT
CCATTGTGCGACCAGAGAACGTGACACGCGAAACCGCCACCTTCAACCTGCCGTTTATCTCGCTGGGGCAAGTGGGCGAT
GGCAAGCTGATGGTTATCGGTAACCCACACTACAACAGCATCCTGCGTTGCCCGAACGGCTACAGCTGGAACGGGGGCGT
TAATAAAGACGGACAGTGTACGCTCAACAGCGACCCGGATGACATGAAGAACTTCATGGAGAACGTGCTGCGCTATCTGT
CAAATGATCGCTGGTTGCCGGATGCAAAATCCAGTATGACCGTGGGTACTAACCTGGACACGGTATATTTCAAAAAACAT
GGTCAGGTGCTGGGAAATAGCGCACCGTTTGCGTTCCACAAGGATTTCACTGGCATCACGGTCAAACCAATGACCAGCTA
TGGCAATCTGAATCCAGATGAAGTTCCTCTGTTGATCCTCAATGGCTTTGAATACGTCACACAATGGGGTAGCGATCCTT
ACTCCATTCCTCTGCGCGCAGATACCAGCAAACCGAAGCTGACCCAGCAGGATGTGACCGATTTGATCGCCTATATGAAC
AAAGGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCATCTGGCTTTGTACGTCTGCT
TGATGCCGCAGGTTTGTCGATGGCGCTTAACAAGTCGGTAGTAAATAACGATCCGCAAGGCTACCCTGACCGTGTTCGTC
AACGACGTTCAACGCCAATTTGGGTCTATGAGCGTTATCCGGCTGTCGATGGTAAACCACCGTATACCATTGATGACACC
ACGAAAGAAGTTATCTGGAAATATCAGCAAGAAAACAAACCTGATGACAAACCGAAGCTGGAAGTTGCCAGCTGGCAGGA
AGAAGTTGAGGGTAAACAGGTAACCCAATTCGCCTTTATTGATGAAGCCGACCACAAAACGCCTGAGTCACTGGCTGCGG
CAAAACAGAGAATTCTGGACGCGTTCCCAGGGCTGGAAGTGTGTAAGGATTCTGACTATCACTATGAGGTCAACTGTCTG
GAATACCGCCCAGGCACGGGTGTGCCGGTAACCGGTGGCATGTATGTTCCGCAGTATACGCAGCTGGATCTTGGAGCTGA
CACTGCGAAAGCGATGCTGCAGGCTGCGGATTTAGGCACCAATATTCAGCGCCTGTATCAGCATGAGCTTTATTTCCGTA
CCAATGGCCGCCAGGGTGAGCGTCTCAACAGCGTCGATCTGGAACGTTTATACCAAAACATGTCCGTCTGGCTGTGGAAC
GAGACGAAATATCGTTATGAAGAGGGTAAAGAAGACGAGCTGGGCTTTAAAACGTTCACTGAGTTTCTGAACTGCTACAC
CAACAATGCATACGTTGGCACGCAGTGTTCCGCTGAGCTGAAAAAATCGCTGATCGATAACAAGATGATTTACGGTGAAG
AAAGCAGCAAAGCGGGCATGATGAACCCGAGCTACCCGCTCAACTATATGGAAAAACCGCTGACACGCCTGATGCTGGGC
CGTTCCTGGTGGGATCTGAACATCAAAGTTGATGTTGAGAAGTATCCGGGAGCAGTATCGGAAGAGGGACAGAACGTTAC
TGAAACCATCAGCCTGTACTCGAATCCGACCAAATGGTTTGCAGGTAACATGCAGTCAACTGGCCTGTGGGCACCGGCTC
AGAAAGAGGTCACCATTAAGTCCAATGCGAACGTTCCTGTGACCGTCACCGTGGCGCTGGCTGACGACCTGACCGGAAGA
GAGAAGCATGAAGTCGCGCTGAACCGTCCGCCAAGAGTAACCAAAACGTACTCTCTGGACGCTAGTGGTACGGTGAAATT
CAAGGTGCCTTACGGTGGTCTGATTTATATCAAAGGCGACAGCAAAGACAATGAATCTGCCAGCTTCACCTTTACTGGTG
TGGTAAAAGCACCGTTCTATAAAGACGGCGCATGGAAAAACGATCTGAACTCACCGGCTCCGCTGGGTGAGCTGGAATCA
GACGCTTTCGTTTATACCGCACCGAAGAAGAACCTGAATGCCAGCAATTACACTGGCGGACTGAAGCAATTCGCTAACGA
TCTGGATACCTTTGCCAGCTCGATGAATGATTTCTACGGTCGTAATGAGGAAGACGGTAAGCACCGGATGTTTACCTATA
AAAACTTGACGGGCCACAAGCATCGTTTCGCCAACGATGTGCAGATCTCCATCGGTGATGCGCATTCGGGTTATCCGGTA
ATGAACAGCAGCTTCTCGACGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGCTGATCTGGCACGAAGTAGG
GCACAACGCCGCAGAAACGCCGCTGACTGTTCCAGGCGCGACCGAAGTGGCGAACAACGTGCTGGCGCTGTACATGCAGG
ATCGTTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCGTCGCACCGGAATATCTGGAGGAGAGCAACGGTCAG
GCATGGGCGCGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCGCAGCTGAAGGAATGGGCAGAGAAAAACTTTGATAT
CAAGAAATGGTATCCAGAAGGTGAATTGCCGAAGTTCTTCAGCGATCGTGAAGGGATGAAAGGCTGGAACCTGTTCCAGT
TGATGCACCGTAAAGCGCGCGGCGATGACGTTGGTGACAAGACCTTTGGTGGCAAGAATTACTGTGCTGAATCCAACGGT
AACGCTGCGGACACGCTGATGCTGTGTGCCTCCTGGGTCGCCCAGACGGATCTTTCGGAGTTCTTTAAGAAATGGAATCC
GGGTGCGAATGCTTACCAGCTGCCGGGGGCGAGCGAGATGAGCTTCGAGGGCGGTGTGAGCCAGTCGGCGTACAACACGC
TGGCGTCACTCAAGCTGCCGAAACCGGAACAGGGACCGGAAACCATTAACAAGGTTACCGAGCATAAGATGTCTGTCGAG
TAA

Protein sequence :
MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPTPDPEPTP
EPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTPGDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFSLEDA
QELAGSDNKKSNALSLVTSMNSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTS
PVVPATTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGDGVVGVNYYTNSGRGVTGENGEFSFSWGETISFG
IDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSKAGQNHTRVVPDEVRKVFAEYPNVINEIINLSLSNGATLGEG
EQVVNLPNEFIEQFKTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNF
YGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPENVTRETATFNLPFISLGQVGD
GKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSNDRWLPDAKSSMTVGTNLDTVYFKKH
GQVLGNSAPFAFHKDFTGITVKPMTSYGNLNPDEVPLLILNGFEYVTQWGSDPYSIPLRADTSKPKLTQQDVTDLIAYMN
KGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRSTPIWVYERYPAVDGKPPYTIDDT
TKEVIWKYQQENKPDDKPKLEVASWQEEVEGKQVTQFAFIDEADHKTPESLAAAKQRILDAFPGLEVCKDSDYHYEVNCL
EYRPGTGVPVTGGMYVPQYTQLDLGADTAKAMLQAADLGTNIQRLYQHELYFRTNGRQGERLNSVDLERLYQNMSVWLWN
ETKYRYEEGKEDELGFKTFTEFLNCYTNNAYVGTQCSAELKKSLIDNKMIYGEESSKAGMMNPSYPLNYMEKPLTRLMLG
RSWWDLNIKVDVEKYPGAVSEEGQNVTETISLYSNPTKWFAGNMQSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTGR
EKHEVALNRPPRVTKTYSLDASGTVKFKVPYGGLIYIKGDSKDNESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELES
DAFVYTAPKKNLNASNYTGGLKQFANDLDTFASSMNDFYGRNEEDGKHRMFTYKNLTGHKHRFANDVQISIGDAHSGYPV
MNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQ
AWARGGAGDRLLMYAQLKEWAEKNFDIKKWYPEGELPKFFSDREGMKGWNLFQLMHRKARGDDVGDKTFGGKNYCAESNG
NAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLKLPKPEQGPETINKVTEHKMSVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85238.1 hypothetical protein Not tested PAI V 536 Protein 0.0 88
VC0395_A0370 YP_001216326.1 lipoprotein Not tested VPI-1 Protein 0.0 49
VC0845 NP_230493.1 hypothetical protein Not tested VPI-1 Protein 0.0 49
acfD AAK20802.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 49
acfD ACK75646.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 49
acfD ACK75664.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 49
acfD ACK75670.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 49
acfD ACK75661.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 49
acfD ACK75667.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 49
acfD ACK75658.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 49
acfD ACK75655.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75649.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75652.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EKO11_0748 YP_005276462.1 putative lipoprotein AcfD precursor VFG0106 Protein 0.0 49